RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ASNSP08243 561 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 CDC25AP30304 524 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PHKA2P46019 1235 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 SLMAPQ14BN4 828 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 SLC10A5Q5PT55 438 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 ARHGEF1Q92888 912 aaKnown RBP18.8■□□□□ 0.6
MCF2L-208ENST00000397030 MAGOHBQ96A72 148 aaKnown RBP18.8■□□□□ 0.6
MCF2L-208ENST00000397030 TRIM11Q96F44 468 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 NUP153P49790 1475 aaKnown RBP18.8■□□□□ 0.6
MCF2L-208ENST00000397030 TMEM247A6NEH6 219 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 SNX2O60749 519 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 TEKT4Q8WW24 435 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 LZICQ8WZA0 190 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 IQCDQ96DY2 449 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 EIF3CLB5ME19 914 aaKnown RBP18.79■□□□□ 0.6
MCF2L-208ENST00000397030 ERBB3P21860 1342 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 MSH2P43246 934 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 TAF1CQ15572 869 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-208ENST00000397030 EIF3CQ99613 913 aaKnown RBP18.79■□□□□ 0.6
MCF2L-208ENST00000397030 ATP6V0A4Q9HBG4 840 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 A0A0G2JLW4 131 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 SERPIND1P05546 499 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 CHRNA5P30532 468 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 KIF19Q2TAC6 998 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-208ENST00000397030 BBOF1Q8ND07 529 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 NDUFA8P51970 172 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 SPP2Q13103 211 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
MCF2L-208ENST00000397030 GPSM2P81274 684 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 PLA2G4BP0C869 781 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 SSTR3P32745 418 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-208ENST00000397030 THEMIS2Q5TEJ8 643 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 GRAMD1CQ8IYS0 662 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 RASSF2P50749 326 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 SCRN1Q12765 414 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 CAPRIN1Q14444 709 aaKnown RBP18.78■□□□□ 0.6
MCF2L-208ENST00000397030 UBE3CQ15386 1083 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 LRRC31Q6UY01 552 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 NLRP10Q86W26 655 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 ERICH1Q86X53 443 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 SPON2Q9BUD6 331 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 MTIF3Q9H2K0 278 aaKnown RBP18.78■□□□□ 0.6
MCF2L-208ENST00000397030 GPC3P51654 580 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 ABCC4O15439 1325 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 MOCS3O95396 460 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 ZBED1O96006 694 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 VEPH1Q14D04 833 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 TMCO5AQ8N6Q1 288 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 TBK1Q9UHD2 729 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 BAIAP2L1Q9UHR4 511 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 WDR91A4D1P6 747 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 PI4K2BG5E9Z4 385 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 C10orf76Q5T2E6 689 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 LCA5Q86VQ0 697 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 DPF3Q92784 378 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
MCF2L-208ENST00000397030 SURF1Q15526 300 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 TAS2R42Q7RTR8 314 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 TOPORSQ9NS56 1045 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-208ENST00000397030 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 COPB2P35606 906 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 LBRQ14739 615 aaKnown RBP18.77■□□□□ 0.6
MCF2L-208ENST00000397030 ZNF667Q5HYK9 610 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 KLC3Q6P597 504 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 NUDT18Q6ZVK8 323 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 NCLNQ969V3 563 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 PFKFB2O60825 505 aa18.77■□□□□ 0.6
MCF2L-208ENST00000397030 ATP7AQ04656 1500 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 PDIA3P30101 505 aaKnown RBP18.77■□□□□ 0.59
MCF2L-208ENST00000397030 GRIK1P39086 918 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 ARHGDIAP52565 204 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 SP110Q9HB58 689 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 CLNS1AP54105 237 aaKnown RBP18.77■□□□□ 0.59
MCF2L-208ENST00000397030 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 TUBGCP2Q9BSJ2 902 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 FANCLQ9NW38 375 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 FEM1BQ9UK73 627 aa18.77■□□□□ 0.59
MCF2L-208ENST00000397030 CLDN3O15551 220 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 DNAJC6O75061 913 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 NCF2P19878 526 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-208ENST00000397030 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 NEUROG2Q9H2A3 272 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 USP17L10C9JJH3 530 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 E5RI56 91 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 LMNB2Q03252 620 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 SLC9A5Q14940 896 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 IMPG1Q17R60 797 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 CCDC38Q502W7 563 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 GIMAP8Q8ND71 665 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-208ENST00000397030 XAB2Q9HCS7 855 aaKnown RBP18.76■□□□□ 0.59
MCF2L-208ENST00000397030 NDFIP2Q9NV92 336 aa18.76■□□□□ 0.59
MCF2L-208ENST00000397030 KLHL8Q9P2G9 620 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-208ENST00000397030 COPB1P53618 953 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms