RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 CNTN2Q02246 1040 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 NR1I3Q14994 352 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 FAM26FQ5R3K3 315 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 LXNQ9BS40 222 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 ZKSCAN5Q9Y2L8 839 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 TRPM7Q96QT4 1865 aa13.22□□□□□ -0.29
GTF2A2-202ENST00000396060 ESPNB1AK53 854 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 PEX10O60683 326 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 IDEP14735 1019 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 EEF1GP26641 437 aaKnown RBP13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 ZNF131P52739 623 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 PSMC5P62195 406 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 LRRC63Q05C16 580 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 KIAA1217Q5T5P2 1943 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 IRF2BP1Q8IU81 584 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 VSTM4Q8IW00 320 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 DRC7Q8IY82 874 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 PCDHA10Q9Y5I2 948 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
GTF2A2-202ENST00000396060 ATG7O95352 703 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 GSDMDP57764 484 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 KCTD2Q14681 263 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 BMT2Q1RMZ1 405 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 KCNV1Q6PIU1 500 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 EPM2AIP1Q7L775 607 aaPredicted RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 FGD4Q96M96 766 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 REEP2Q9BRK0 252 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 RUSC1Q9BVN2 902 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 STRNO43815 780 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 CYP2C8P10632 490 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 ZCWPW2Q504Y3 356 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 ABHD15Q6UXT9 468 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 ANKRD20A12PQ8NF67 263 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 HPS3Q969F9 1004 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 MMP19Q99542 508 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 INTS13Q9NVM9 706 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 SLC9A2Q9UBY0 812 aa13.2□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNFX1Q9P2E3 1918 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 PASKQ96RG2 1323 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 PBX1P40424 430 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 HUNKP57058 714 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 ZC3H3Q8IXZ2 948 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 PTPN18Q99952 460 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 SRRTQ9BXP5 876 aaKnown RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 JPH1Q9HDC5 661 aaPredicted RBP13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
GTF2A2-202ENST00000396060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.19□□□□□ -0.35e-8■■□□□ 11.5
GTF2A2-202ENST00000396060 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 ZBTB39O15060 712 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 STBD1O95210 358 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 PSAPP07602 524 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 RARRES1P49788 294 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 SP2Q02086 613 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 FSTL1Q12841 308 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms