RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 BIRC2Q13490 618 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 PNOCQ13519 176 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 TCEAL1Q15170 157 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 TMEM266Q2M3C6 531 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 FBXO11Q86XK2 927 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 IRF2BP1Q8IU81 584 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 LARGE2Q8N3Y3 721 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 MB21D1Q8N884 522 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 CEP112Q8N8E3 955 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 EPSTI1Q96J88 318 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 CSRNP1Q96S65 589 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 P2RX7Q99572 595 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 SDF4Q9BRK5 362 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 AS3MTQ9HBK9 375 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 ATXN2Q99700 1313 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 USP17L10C9JJH3 530 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 PPP1R37O75864 691 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 ERLIN2O94905 339 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 SYF2O95926 243 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 TUBBP07437 444 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 ATP1A3P13637 1013 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 EDNRBP24530 442 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 CCNE1P24864 410 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 MARCKSP29966 332 aaPredicted RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 SLC1A4P43007 532 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 SCNN1DP51172 638 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 CEBPZQ03701 1054 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 CALCRLQ16602 461 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 KIAA1755Q5JYT7 1200 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 DPY19L2P1Q6NXN4 242 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 PROCA1Q8NCQ7 364 aaPredicted RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS41-203ENST00000395969 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 DNAJC7Q99615 494 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 TDRD3Q9H7E2 651 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 ZSWIM4Q9H7M6 989 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 FAM204AQ9H8W3 233 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 SUGCTQ9HAC7 445 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 PPP1R9AQ9ULJ8 1098 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 AFG3L2Q9Y4W6 797 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 COL4A4P53420 1690 aaPredicted RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 LRRIQ3A6PVS8 624 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 SLC16A3O15427 465 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 ATG7O95352 703 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 SPATA31C1P0DKV0 1188 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 CD44P16070 742 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 GAP43P17677 238 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 UBASH3AP57075 661 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 POU5F1Q01860 360 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 FMR1Q06787 632 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS41-203ENST00000395969 HAUS3Q68CZ6 603 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 WDR93Q6P2C0 686 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 TOGARAM2Q6ZUX3 1019 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 USP50Q70EL3 339 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 CABP7Q86V35 215 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 FAM114A1Q8IWE2 563 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 SREK1Q8WXA9 508 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 BAG1Q99933 345 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 NUP58Q9BVL2 599 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 WDR11Q9BZH6 1224 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 CDC23Q9UJX2 597 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 PCDHB8Q9UN66 801 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 STX8Q9UNK0 236 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 PCDHB13Q9Y5F0 798 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 BTNL10A8MVZ5 291 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 RBAK-RBAKDNI3L0D1 243 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 SLC37A4O43826 429 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 LMOD1P29536 600 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 USP8P40818 1118 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 ARHGAP4P98171 946 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 INF2Q27J81 1249 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 TTC19Q6DKK2 380 aaPredicted RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 TC2NQ8N9U0 490 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 GPKOWQ92917 476 aaPredicted RBP eCLIP5.92□□□□□ -1.465e-7■■■■■ 43.5
VPS41-203ENST00000395969 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 BORCS6Q96GS4 357 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 IWS1Q96ST2 819 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 DUSP9Q99956 384 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 MKNK1Q9BUB5 465 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 MYO1AQ9UBC5 1043 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 DDX25Q9UHL0 483 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 NENFQ9UMX5 172 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 SYNRGQ9UMZ2 1314 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 IGKV6D-21A0A0A0MT36 114 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 LGALS16A8MUM7 142 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 DHX15O43143 795 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 RNF40O75150 1001 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 EYA4O95677 639 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 FGFR1OPO95684 399 aaKnown RBP5.92□□□□□ -1.46
VPS41-203ENST00000395969 GH2P01242 217 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 HOXC6P09630 235 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 VSNL1P62760 191 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 FKBP1BP68106 108 aa5.92□□□□□ -1.46
VPS41-203ENST00000395969 PAK1Q13153 545 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms