RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 MSH4O15457 936 aa21.52■■□□□ 1.04
LMNB1-202ENST00000395354 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
LMNB1-202ENST00000395354 CCT6AP40227 531 aaKnown RBP21.52■■□□□ 1.04
LMNB1-202ENST00000395354 SPIRE1Q08AE8 756 aa21.52■■□□□ 1.04
LMNB1-202ENST00000395354 DHX8Q14562 1220 aaKnown RBP21.52■■□□□ 1.04
LMNB1-202ENST00000395354 XPO4Q9C0E2 1151 aaKnown RBP21.52■■□□□ 1.04
LMNB1-202ENST00000395354 ADCY3O60266 1144 aa21.51■■□□□ 1.03
LMNB1-202ENST00000395354 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-202ENST00000395354 SETQ01105 290 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-202ENST00000395354 COBLL1Q53SF7 1204 aa21.51■■□□□ 1.03
LMNB1-202ENST00000395354 TRMT44Q8IYL2 757 aaKnown RBP21.51■■□□□ 1.03
LMNB1-202ENST00000395354 GIMAP8Q8ND71 665 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-202ENST00000395354 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-202ENST00000395354 SYNGAP1Q96PV0 1343 aa21.51■■□□□ 1.03
LMNB1-202ENST00000395354 MCM3APO60318 1980 aa21.51■■□□□ 1.03
LMNB1-202ENST00000395354 STAM2O75886 525 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 SERPINC1P01008 464 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 ATP1A3P13637 1013 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 CYP2C19P33261 490 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 CLCN1P35523 988 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 PAK1Q13153 545 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 STIM1Q13586 685 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 CEP55Q53EZ4 464 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 EEPD1Q7L9B9 569 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 NIPA1Q7RTP0 329 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 ADSSL1Q8N142 457 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 CYP2W1Q8TAV3 490 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 TRIB2Q92519 343 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 MXRA8Q9BRK3 442 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 EXOC1Q9NV70 894 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 UBIAD1Q9Y5Z9 338 aa21.5■■□□□ 1.03
LMNB1-202ENST00000395354 ZNF500O60304 480 aaPredicted RBP21.49■■□□□ 1.03
LMNB1-202ENST00000395354 IGHA2P01877 340 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 ELNP15502 786 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 ITGB5P18084 799 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 UBASH3AP57075 661 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 ASIC1P78348 528 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 MCM6Q14566 821 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 KLHL10Q6JEL2 608 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 CCDC186Q7Z3E2 898 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 SMYD4Q8IYR2 804 aaPredicted RBP21.49■■□□□ 1.03
LMNB1-202ENST00000395354 GJA10Q969M2 543 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 VAV3Q9UKW4 847 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 PTPN22Q9Y2R2 807 aa21.49■■□□□ 1.03
LMNB1-202ENST00000395354 MEIS1O00470 390 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 RPA1P27694 616 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 MFSD14CQ5VZR4 134 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 UNC13DQ70J99 1090 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 PXYLP1Q8TE99 480 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 SLC5A5Q92911 643 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 ABHD16BQ9H3Z7 469 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 JADE2Q9NQC1 790 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 MYMKA6NI61 221 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 RGS20O76081 388 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 CDK11BP21127 795 aaKnown RBP21.48■■□□□ 1.03
LMNB1-202ENST00000395354 PRCPP42785 496 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 GSDMDP57764 484 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 ECM1Q16610 540 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 CDKAL1Q5VV42 579 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 CTU1Q7Z7A3 348 aaKnown RBP21.48■■□□□ 1.03
LMNB1-202ENST00000395354 NLRX1Q86UT6 975 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 DHTKD1Q96HY7 919 aaPredicted RBP21.48■■□□□ 1.03
LMNB1-202ENST00000395354 INPP4AQ96PE3 977 aaPredicted RBP21.48■■□□□ 1.03
LMNB1-202ENST00000395354 POLR3CQ9BUI4 534 aaPredicted RBP21.48■■□□□ 1.03
LMNB1-202ENST00000395354 WDR11Q9BZH6 1224 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 CTNND2Q9UQB3 1225 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 GDAQ9Y2T3 454 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 PTCH2Q9Y6C5 1203 aa21.48■■□□□ 1.03
LMNB1-202ENST00000395354 PTGS1P23219 599 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 PPP2R5CQ13362 524 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 PRAMEF19Q5SWL8 479 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 KCNK18Q7Z418 384 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 FBXO16Q8IX29 292 aaPredicted RBP21.47■■□□□ 1.03
LMNB1-202ENST00000395354 NELFBQ8WX92 580 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 VTA1Q9NP79 307 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 BMP2KQ9NSY1 1161 aaPredicted RBP21.47■■□□□ 1.03
LMNB1-202ENST00000395354 NRBP1Q9UHY1 535 aa21.47■■□□□ 1.03
LMNB1-202ENST00000395354 PSMA7O14818 248 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 PSMD10O75832 226 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 MUTP22033 750 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 PSMD2Q13200 908 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 MTMR1Q13613 665 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 ACVR2BQ13705 512 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 NCAPH2Q6IBW4 605 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 SLAIN1Q8ND83 568 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 GPRASP2Q96D09 838 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 CTAGE1Q96RT6 745 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 KATNBL1Q9H079 304 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 SAMSN1Q9NSI8 373 aaKnown RBP21.46■■□□□ 1.03
LMNB1-202ENST00000395354 KIAA1024Q9UPX6 916 aa21.46■■□□□ 1.03
LMNB1-202ENST00000395354 MAFGO15525 162 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 MED24O75448 989 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 GRK4P32298 578 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 STX17P56962 302 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 SPAG1Q07617 926 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 TPD52L1Q16890 204 aaPredicted RBP21.45■■□□□ 1.02
LMNB1-202ENST00000395354 CCDC144BQ3MJ40 725 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 TAPT1Q6NXT6 567 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms