RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 PSMD2Q13200 908 aa13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 POSTNQ15063 836 aa13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 ANGEL2Q5VTE6 544 aaKnown RBP13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 TLDC1Q6P9B6 456 aa13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 CHP1Q99653 195 aa13.04□□□□□ -0.32
PPP3CB-203ENST00000394828 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 KIF3CO14782 793 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 ASNSP08243 561 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 PRPHP41219 470 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 EPS15P42566 896 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 CDR1P51861 262 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 STAT2P52630 851 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 PPFIBP1Q86W92 1011 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 ZNF473Q8WTR7 871 aaKnown RBP13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 STAMBPL1Q96FJ0 436 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 ETAA1Q9NY74 926 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 H7C1D1 291 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 LAD1O00515 517 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SLC37A4O43826 429 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SARSP49591 514 aaKnown RBP13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 SMTNP53814 917 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 CAGE1Q8TC20 777 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
PPP3CB-203ENST00000394828 A0A1B0GUA9 196 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 MEIS2O14770 477 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 TDP2O95551 362 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 LSP1P33241 339 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 NR1I3Q14994 352 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 USH1GQ495M9 461 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 CHADLQ6NUI6 762 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 FUKQ8N0W3 1084 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 AMNQ9BXJ7 453 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 PPANQ9NQ55 473 aaKnown RBP13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.32
PPP3CB-203ENST00000394828 LGR5O75473 907 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 GYPCP04921 128 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 OR52Z1P0C646 297 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 ZNF18P17022 549 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 MYO1EQ12965 1108 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 DGKZQ13574 1117 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 FBXO11Q86XK2 927 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 SPATA20Q8TB22 786 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 PAGE5Q96GU1 130 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 CPSF2Q9P2I0 782 aaKnown RBP13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 L3MBTL1Q9Y468 752 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 MTMR9Q96QG7 549 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 MTRQ99707 1265 aa13.02□□□□□ -0.33
PPP3CB-203ENST00000394828 ADCY2Q08462 1091 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 ZC3H12AQ5D1E8 599 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 B4GALNT4Q76KP1 1039 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 SPATS2LQ9NUQ6 558 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 MFAP3LO75121 409 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 EZRP15311 586 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 CCT8L2Q96SF2 557 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 RANBP17Q9H2T7 1088 aaKnown RBP13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 PICK1Q9NRD5 415 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
PPP3CB-203ENST00000394828 E7EVH7 732 aa13□□□□□ -0.33
PPP3CB-203ENST00000394828 ERCC3P19447 782 aa13□□□□□ -0.33
PPP3CB-203ENST00000394828 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
PPP3CB-203ENST00000394828 HPDP32754 393 aaPredicted RBP13□□□□□ -0.33
PPP3CB-203ENST00000394828 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
PPP3CB-203ENST00000394828 LRRC1Q9BTT6 524 aa13□□□□□ -0.33
PPP3CB-203ENST00000394828 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
PPP3CB-203ENST00000394828 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms