RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 KLRC3Q07444 240 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 NUCKS1Q9H1E3 243 aaKnown RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 IKZF4Q9H2S9 585 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 DHX36Q9H2U1 1008 aaKnown RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 GCNT4Q9P109 453 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 ECM29Q5VYK3 1845 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 KRIT1O00522 736 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 CALUO43852 315 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 GH2P01242 217 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 GLI1P08151 1106 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 CRKP46108 304 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 PTK2Q05397 1052 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 NNTQ13423 1086 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 FIGNQ5HY92 759 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 KLHDC7AQ5VTJ3 777 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 CATSPER3Q86XQ3 398 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 REEP2Q9BRK0 252 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 BCAS3Q9H6U6 928 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 PPANQ9NQ55 473 aaKnown RBP11.55□□□□□ -0.56
ACTN1-203ENST00000394419 RABGAP1Q9Y3P9 1069 aa11.55□□□□□ -0.56
ACTN1-203ENST00000394419 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 hCG_1984214I3L0E3 225 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 FLOT1O75955 427 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 CASP4P49662 377 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 VPS72Q15906 364 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 HS2ST1Q7LGA3 356 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 PROM2Q8N271 834 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 ZNF713Q8N859 430 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 TSEN2Q8NCE0 465 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 BAP1Q92560 729 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 COA1Q9GZY4 146 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 PSD3Q9NYI0 1048 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 TCP10L2B9ZVM9 353 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 KRT13P13646 458 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 IL1R1P14778 569 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 SHMT1P34896 483 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 KCNA1Q09470 495 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 TRADDQ15628 312 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 GBP6Q6ZN66 633 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 SLFN12Q8IYM2 578 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 H2AFZP0C0S5 128 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 SLC18A3Q16572 532 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 IFI16Q16666 785 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 PPP4R3AQ6IN85 833 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 H2AFVQ71UI9 128 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 UHMK1Q8TAS1 419 aaKnown RBP11.54□□□□□ -0.56
ACTN1-203ENST00000394419 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
ACTN1-203ENST00000394419 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 ZC2HC1CQ53FD0 456 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-203ENST00000394419 MUM1L1Q5H9M0 696 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 ZIM3Q96PE6 472 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 VIPAS39Q9H9C1 493 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 DDTLA6NHG4 134 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-203ENST00000394419 ZBTB39O15060 712 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 TLR2O60603 784 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 EXOC3O60645 756 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 UCHL3P15374 230 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 KNOP1Q1ED39 458 aaKnown RBP11.53□□□□□ -0.56
ACTN1-203ENST00000394419 TTC31Q49AM3 519 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-203ENST00000394419 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
ACTN1-203ENST00000394419 SSU72P8A0A1W2PR75 194 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 NR3C1P04150 777 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 TRIM49P0CI25 452 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 TRIM49CP0CI26 452 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 STAT1P42224 750 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 IRAK1P51617 712 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 CPXCR1Q8N123 301 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 MMGT1Q8N4V1 131 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 CEP63Q96MT8 703 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.56
ACTN1-203ENST00000394419 SCAF8Q9UPN6 1271 aaKnown RBP11.52□□□□□ -0.56
ACTN1-203ENST00000394419 CTDP1Q9Y5B0 961 aaPredicted RBP11.52□□□□□ -0.56
ACTN1-203ENST00000394419 GOLGA8KD6RF30 607 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 GAS7O60861 476 aa11.52□□□□□ -0.57
ACTN1-203ENST00000394419 CTNNA1P35221 906 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms