RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.21	□□□□□ -0.77
MITF-205	ENST00000394348	RAD9B	Q6WBX8	426 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	GPC2	Q8N158	579 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	SCFD1	Q8WVM8	642 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	ZNF592	Q92610	1267 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	GJA10	Q969M2	543 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	NACC1	Q96RE7	527 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	ZNF577	Q9BSK1	485 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	NUCKS1	Q9H1E3	243 aa	Known RBP	10.21	□□□□□ -0.77
MITF-205	ENST00000394348	KCTD10	Q9H3F6	313 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	NDST4	Q9H3R1	872 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	PICK1	Q9NRD5	415 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	EMILIN3	Q9NT22	766 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.21	□□□□□ -0.77
MITF-205	ENST00000394348	ODF2L	Q9ULJ1	636 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	TRAF3IP3	Q9Y228	551 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	SIK3	Q9Y2K2	1263 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	UBIAD1	Q9Y5Z9	338 aa		10.21	□□□□□ -0.77
MITF-205	ENST00000394348	LOC285556	D6RIA3	1793 aa		10.21	□□□□□ -0.78
MITF-205	ENST00000394348	SMCHD1	A6NHR9	2005 aa		10.21	□□□□□ -0.78
MITF-205	ENST00000394348	EML1	O00423	815 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	PDXK	O00764	312 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ATP2A1	O14983	1001 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	SLC16A3	O15427	465 aa	Known RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	CALU	O43852	315 aa	Predicted RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	KIF5C	O60282	957 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	TBCA	O75347	108 aa	Known RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	LYPLA2	O95372	231 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	HOXB3	P14651	431 aa	Predicted RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	TRIM21	P19474	475 aa	Known RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	CYLC1	P35663	651 aa	Predicted RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ZNF131	P52739	623 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ERVK-24	P63145	666 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	R3HDM1	Q15032	1099 aa	Known RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	STXBP4	Q6ZWJ1	553 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	SAMD7	Q7Z3H4	446 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ZNF280C	Q8ND82	737 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	RDM1	Q8NG50	284 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	CYP2W1	Q8TAV3	490 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	CPLX3	Q8WVH0	158 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	HPS3	Q969F9	1004 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	REEP2	Q9BRK0	252 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	TIPIN	Q9BVW5	301 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	TANGO6	Q9C0B7	1094 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ZNF541	Q9H0D2	1346 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	JADE2	Q9NQC1	790 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	GPRC5D	Q9NZD1	345 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	ADAMTS5	Q9UNA0	930 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.2	□□□□□ -0.78
MITF-205	ENST00000394348	GJA3	Q9Y6H8	435 aa		10.2	□□□□□ -0.78
MITF-205	ENST00000394348	RLF	Q13129	1914 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	PAPPA2	Q9BXP8	1791 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	IPO5	O00410	1097 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TRAF5	O00463	557 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	PES1	O00541	588 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	CETN3	O15182	167 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	FLOT1	O75955	427 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	SLITRK3	O94933	977 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	NDUFA10	O95299	355 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	MAPT	P10636	758 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TAL1	P17542	331 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	PTPRA	P18433	802 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	LMNB1	P20700	586 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	GUCY2C	P25092	1073 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	RPL13	P26373	211 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	CASQ1	P31415	396 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	KRT83	P78385	493 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	MTMR2	Q13614	643 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	ALCAM	Q13740	583 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	KNOP1	Q1ED39	458 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	SUPT20HL1	Q3ZLR7	823 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	C1orf186	Q6ZWK4	172 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	FRMD5	Q7Z6J6	570 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	CREBRF	Q8IUR6	639 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TRIM59	Q8IWR1	403 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	EHBP1	Q8NDI1	1231 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TBC1D5	Q92609	795 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	SYN2	Q92777	582 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	AGBL1	Q96MI9	1066 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	BHMT2	Q9H2M3	363 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	MRPL44	Q9H9J2	332 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	METTL14	Q9HCE5	456 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TBC1D22B	Q9NU19	505 aa		10.19	□□□□□ -0.78
MITF-205	ENST00000394348	TYW1	Q9NV66	732 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	DBR1	Q9UK59	544 aa	Known RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.19	□□□□□ -0.78
MITF-205	ENST00000394348	RASSF10	A6NK89	507 aa		10.18	□□□□□ -0.78
MITF-205	ENST00000394348	EIF3CL	B5ME19	914 aa	Known RBP	10.18	□□□□□ -0.78
MITF-205	ENST00000394348	VWA5A	O00534	786 aa		10.18	□□□□□ -0.78
MITF-205	ENST00000394348	NFIB	O00712	420 aa		10.18	□□□□□ -0.78
MITF-205	ENST00000394348	MAFG	O15525	162 aa		10.18	□□□□□ -0.78
MITF-205	ENST00000394348	STAM2	O75886	525 aa		10.18	□□□□□ -0.78
MITF-205	ENST00000394348	IPO7	O95373	1038 aa	Known RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms