RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LAMB1P07942 1786 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 SNX1Q13596 522 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 SPDYCQ5MJ68 293 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 C4orf32Q8N8J7 132 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 TMEM59LQ9UK28 342 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 RTCBQ9Y3I0 505 aaKnown RBP20.6■□□□□ 0.89
HOXC6-202ENST00000394331 WFS1O76024 890 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 NPTXRO95502 500 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 ODF2Q5BJF6 829 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 ZSCAN29Q8IWY8 852 aaPredicted RBP20.6■□□□□ 0.89
HOXC6-202ENST00000394331 TLCD1Q96CP7 247 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 MAST2Q6P0Q8 1798 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 CCDC194A0A1B0GVG4 234 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 FKBP15Q5T1M5 1219 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 KRT26Q7Z3Y9 468 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 MTRQ99707 1265 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 TUBGCP2Q9BSJ2 902 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 RGL1Q9NZL6 768 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 JAG2Q9Y219 1238 aa20.6■□□□□ 0.89
HOXC6-202ENST00000394331 VIMP08670 466 aaKnown RBP20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ABL2P42684 1182 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ANKRD20A2Q5SQ80 823 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ANKRD20A1Q5TYW2 823 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ANKRD20A3Q5VUR7 823 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 TRPM8Q7Z2W7 1104 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 KLHL23Q8NBE8 558 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 CCDC134Q9H6E4 229 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ROBO3Q96MS0 1386 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 STAT6P42226 847 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 TBC1D1Q86TI0 1168 aaPredicted RBP20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ZNF444Q8N0Y2 327 aaPredicted RBP20.59■□□□□ 0.89
HOXC6-202ENST00000394331 CCDC24Q8N4L8 307 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 INPP4AQ96PE3 977 aaPredicted RBP20.59■□□□□ 0.89
HOXC6-202ENST00000394331 KRT12Q99456 494 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 PLCD4Q9BRC7 762 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 ARHGAP20Q9P2F6 1191 aa20.59■□□□□ 0.89
HOXC6-202ENST00000394331 KIAA1551Q9HCM1 1747 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 NCK2O43639 380 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 LDHCP07864 332 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 PPP4CP60510 307 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 SGSM1Q2NKQ1 1148 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 DTHD1Q6ZMT9 781 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 DAGLBQ8NCG7 672 aa20.58■□□□□ 0.89
HOXC6-202ENST00000394331 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.89
HOXC6-202ENST00000394331 LBRQ14739 615 aaKnown RBP20.58■□□□□ 0.88
HOXC6-202ENST00000394331 FAM114A1Q8IWE2 563 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.88
HOXC6-202ENST00000394331 MS4A14Q96JA4 679 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 PSMB7Q99436 277 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 OSBPL1AQ9BXW6 950 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 NOVA2Q9UNW9 492 aaKnown RBP20.58■□□□□ 0.88
HOXC6-202ENST00000394331 GDAQ9Y2T3 454 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 CASZ1Q86V15 1759 aa20.58■□□□□ 0.88
HOXC6-202ENST00000394331 RAD51CO43502 376 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 FLOT1O75955 427 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 ATP2A2P16615 1042 aaKnown RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 CNGA1P29973 690 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 CTCFP49711 727 aaPredicted RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 STAG2Q8N3U4 1231 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 GPR75-ASB3A0A0A6YYF3 556 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 ADAMTS3O15072 1205 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 EIF3BP55884 814 aaKnown RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 MRPS35P82673 323 aaKnown RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 TTI2Q6NXR4 508 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 SDCCAG8Q86SQ7 713 aaPredicted RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 GBP7Q8N8V2 638 aaPredicted RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 SH3RF3Q8TEJ3 882 aaPredicted RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 DYNLL2Q96FJ2 89 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 ZNF287Q9HBT7 754 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 DISC1Q9NRI5 854 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 MAD2L2Q9UI95 211 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 ASB3Q9Y575 518 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 FAM205AQ6ZU69 1335 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 COL24A1Q17RW2 1714 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 M0R2N6 131 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 PDLIM1O00151 329 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 PSMA7O14818 248 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 MYL1P05976 194 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 MAGOHP61326 146 aaKnown RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 LAMB3Q13751 1172 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 VPS72Q15906 364 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
HOXC6-202ENST00000394331 MAGOHBQ96A72 148 aaKnown RBP20.57■□□□□ 0.88
HOXC6-202ENST00000394331 TRIM49BA6NDI0 452 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 LAD1O00515 517 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 COQ9O75208 318 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 ERVK-9P63128 1117 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 EZH1Q92800 747 aaPredicted RBP20.56■□□□□ 0.88
HOXC6-202ENST00000394331 NAF1Q96HR8 494 aaKnown RBP20.56■□□□□ 0.88
HOXC6-202ENST00000394331 SPDYE3A6NKU9 549 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 E7ENQ6 273 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 RBAK-RBAKDNI3L0D1 243 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 GNAT1P11488 350 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 MAGEA1P43355 309 aa20.56■□□□□ 0.88
HOXC6-202ENST00000394331 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms