RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 PRPHP41219 470 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 CDK7P50613 346 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 FAM47CQ5HY64 1035 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 NCAPH2Q6IBW4 605 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 SWSAP1Q6NVH7 229 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 ANKRD33Q7Z3H0 272 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 C4orf32Q8N8J7 132 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 PCYT2Q99447 389 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
NDUFC1-202ENST00000394225 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 ATP2C1P98194 919 aaPredicted RBP17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 EPHA7Q15375 998 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 PDXDC2PQ6P474 469 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 DPF3Q92784 378 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 ZNF396Q96N95 335 aaPredicted RBP17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
NDUFC1-202ENST00000394225 EVI5O60447 810 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 BRD1O95696 1058 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 GNAT1P11488 350 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 TECP42680 631 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 TLE2Q04725 743 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 ARL6IP4Q66PJ3 421 aaKnown RBP17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 NEK9Q8TD19 979 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 FAM167AQ96KS9 214 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 STK24Q9Y6E0 443 aa17.08■□□□□ 0.32
NDUFC1-202ENST00000394225 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 EML1O00423 815 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 SMIM10L2AP0DMW4 78 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 SMIM10L2BP0DMW5 78 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 MARK3P27448 753 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 NUCB2P80303 420 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 PKP1Q13835 747 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 PDIA5Q14554 519 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 PLCB4Q15147 1175 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 ATL3Q6DD88 541 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 ATP8B4Q8TF62 1192 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 MYH9P35579 1960 aaKnown RBP17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
NDUFC1-202ENST00000394225 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 POTEMA6NI47 508 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 HBP1O60381 514 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 CLTBP09497 229 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 PSMC5P62195 406 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 PPFIA1Q13136 1202 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 C7orf61Q8IZ16 206 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 TSHZ2Q9NRE2 1034 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
NDUFC1-202ENST00000394225 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 CD4P01730 458 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 OATP04181 439 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 HOXC8P31273 242 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 PTGISQ16647 500 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 EIF2AK1Q9BQI3 630 aaKnown RBP17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 TRMT13Q9NUP7 481 aaKnown RBP17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 LRWD1Q9UFC0 647 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 PRKAG2Q9UGJ0 569 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 WDR81Q562E7 1941 aa17.05■□□□□ 0.32
NDUFC1-202ENST00000394225 COL1A2P08123 1366 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms