RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ZNF543Q08ER8 600 aa10.93□□□□□ -0.66
PSEN1-204ENST00000394164 APOBEC3HQ6NTF7 200 aaKnown RBP10.93□□□□□ -0.66
PSEN1-204ENST00000394164 C8orf74Q6P047 294 aa10.93□□□□□ -0.66
PSEN1-204ENST00000394164 CREG2Q8IUH2 290 aa10.93□□□□□ -0.66
PSEN1-204ENST00000394164 OSBPL7Q9BZF2 842 aa10.93□□□□□ -0.66
PSEN1-204ENST00000394164 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-204ENST00000394164 PCDHA1Q9Y5I3 950 aa10.93□□□□□ -0.66
PSEN1-204ENST00000394164 CCNE1P24864 410 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 CRKP46108 304 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 TRMT1LQ7Z2T5 733 aaKnown RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 DNAJC18Q9H819 358 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 EPB41L5Q9HCM4 733 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 RBM12Q9NTZ6 932 aaKnown RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 STIM2Q9P246 746 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 L3MBTL1Q9Y468 752 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 BUB1BO60566 1050 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 HLA-DOAP06340 250 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 HOXA10P31260 410 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 MDH1P40925 334 aaKnown RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 PRPHP41219 470 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 GABPAQ06546 454 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 ODF2Q5BJF6 829 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 IQCEQ6IPM2 695 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 TCP11Q8WWU5 503 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 RPGRIP1Q96KN7 1286 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 CRAMP1Q96RY5 1269 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
PSEN1-204ENST00000394164 NLRC4Q9NPP4 1024 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
PSEN1-204ENST00000394164 PNMA6FA0A0J9YX94 578 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 POTEB3A0JP26 581 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 POTECB2RU33 542 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 LAD1O00515 517 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 RGL2O15211 777 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 RTN2O75298 545 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 KRT18P05783 430 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 GLI1P08151 1106 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 EEF1GP26641 437 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 UBXN2AP68543 259 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 AMPD3Q01432 767 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 SNX1Q13596 522 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 KCNB1Q14721 858 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ARMC3Q5W041 872 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 POTEBQ6S5H4 581 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 KDM7AQ6ZMT4 941 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 C15orf52Q6ZUT6 534 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 AK8Q96MA6 479 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 MTMR9Q96QG7 549 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 BCAS3Q9H6U6 928 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 NHEJ1Q9H9Q4 299 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 PCDHA12Q9UN75 941 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 TAF1LQ8IZX4 1826 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 CALRP27797 417 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 CYP4A11Q02928 519 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 KIF5AQ12840 1032 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 PPP1R7Q15435 360 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ASPRV1Q53RT3 343 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 PRR16Q569H4 304 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ALS2CLQ60I27 953 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 HIBCHQ6NVY1 386 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 PNMA8AQ86V59 439 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ZNF483Q8TF39 744 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 HAS1Q92839 578 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 CUL5Q93034 780 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 FAM163AQ96GL9 167 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 TACO1Q9BSH4 297 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 THAP9Q9H5L6 903 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
PSEN1-204ENST00000394164 ITIH6Q6UXX5 1313 aa10.91□□□□□ -0.66
PSEN1-204ENST00000394164 BUB1O43683 1085 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 CLTAP09496 248 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 DNM2P50570 870 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 KRT83P78385 493 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 PTPROQ16827 1216 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 AOC3Q16853 763 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-204ENST00000394164 MIIPQ5JXC2 388 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 CNNM4Q6P4Q7 775 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 SPATS2Q86XZ4 545 aaKnown RBP10.9□□□□□ -0.66
PSEN1-204ENST00000394164 NSMCE1Q8WV22 266 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 DHTKD1Q96HY7 919 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-204ENST00000394164 C7orf25Q9BPX7 421 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 SNX12Q9UMY4 172 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 PHF20L1A8MW92 1017 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 TRAF5O00463 557 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 FAM107AO95990 144 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 FECHP22830 423 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 SCTRP47872 440 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms