RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ADAMTS1Q9UHI8 967 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 USP31Q70CQ4 1352 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 ABCC12Q96J65 1359 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 SLFN14P0C7P3 912 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 ANTXR2P58335 489 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 COASYQ13057 564 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 TRIM50Q86XT4 487 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 GDAP1Q8TB36 358 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
CDH11-202ENST00000394156 DHX36Q9H2U1 1008 aaKnown RBP9.91□□□□□ -0.82
CDH11-202ENST00000394156 NUB1Q9Y5A7 615 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 DKC1O60832 514 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH11-202ENST00000394156 MAPK4P31152 587 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 CCNYQ8ND76 341 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 ACCSQ96QU6 501 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 FAM118BQ9BPY3 351 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 CALCOCO1Q9P1Z2 691 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 FAM184BQ9ULE4 1060 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 GNA14O95837 355 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 ZC2HC1CQ53FD0 456 aaPredicted RBP9.91□□□□□ -0.82
CDH11-202ENST00000394156 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 EIF2AK1Q9BQI3 630 aaKnown RBP9.91□□□□□ -0.82
CDH11-202ENST00000394156 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 RNF19AQ9NV58 838 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 SMARCAL1Q9NZC9 954 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 ZNF185O15231 689 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 FAM117BQ6P1L5 589 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 RPUSD2Q8IZ73 545 aaKnown RBP9.91□□□□□ -0.82
CDH11-202ENST00000394156 MMP19Q99542 508 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 MIS12Q9H081 205 aa9.91□□□□□ -0.82
CDH11-202ENST00000394156 CTSHP09668 335 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 ACTN1P12814 892 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 NXNQ6DKJ4 435 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 MS4A14Q96JA4 679 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 MB21D1Q8N884 522 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 LXNQ9BS40 222 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 GGA3Q9NZ52 723 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 FMR1Q06787 632 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH11-202ENST00000394156 ANKS4BQ8N8V4 417 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 K7ERI5 159 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 GAS8O95995 478 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.82
CDH11-202ENST00000394156 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 SCYL1Q96KG9 808 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
CDH11-202ENST00000394156 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH11-202ENST00000394156 BARHL2Q9NY43 387 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 OGFRQ9NZT2 677 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 ATP8A1Q9Y2Q0 1164 aa9.9□□□□□ -0.82
CDH11-202ENST00000394156 ATP2A2P16615 1042 aaKnown RBP9.9□□□□□ -0.83
CDH11-202ENST00000394156 USP14P54578 494 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 NFIAQ12857 509 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 ORC1Q13415 861 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 C12orf60Q5U649 245 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 PODNQ7Z5L7 613 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 SPATA33Q96N06 139 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 PFDN4Q9NQP4 134 aa9.9□□□□□ -0.83
CDH11-202ENST00000394156 KDM4FA0A1W2PPD8 638 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 PSAPP07602 524 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 LIFRP42702 1097 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 DHX9Q08211 1270 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 VPS72Q15906 364 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NBPF9Q3BBW0 867 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 RWDD2AQ9UIY3 292 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NCOA3Q9Y6Q9 1424 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NDUFAB1O14561 156 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 ABI1Q8IZP0 508 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 RILPQ96NA2 401 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 MLXIPLQ9NP71 852 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 CSDE1O75534 798 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 NSFP46459 744 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 ACOT2P49753 483 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 PSMC5P62195 406 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 GRM4Q14833 912 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 ANO4Q32M45 955 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 GJB7Q6PEY0 223 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 FMR1NBQ8N0W7 255 aaPredicted RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 OR6B3Q8NGW1 331 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 RAD54LQ92698 747 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 MAGOHBQ96A72 148 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 TIGD1Q96MW7 591 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SAMD15Q9P1V8 674 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 ACTN4O43707 911 aaKnown RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 GMPSP49915 693 aaPredicted RBP9.89□□□□□ -0.83
CDH11-202ENST00000394156 PLTPP55058 493 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 C10orf76Q5T2E6 689 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 OR6B2Q6IFH4 312 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 CCDC33Q8N5R6 958 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 SLC30A5Q8TAD4 765 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 ERLEC1Q96DZ1 483 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 NT5C1BQ96P26 610 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 DENND3A2RUS2 1198 aa9.89□□□□□ -0.83
CDH11-202ENST00000394156 PALMO75781 387 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms