RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 BTBD18B2RXH4 712 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 BACH1O14867 736 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 ST18O60284 1047 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 LGR5O75473 907 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 MMP1P03956 469 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 CKBP12277 381 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 HOXC8P31273 242 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 THPOP40225 353 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 USP11P51784 963 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 PTK7Q13308 1070 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 BFSP2Q13515 415 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 GPNMBQ14956 572 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 PLCB4Q15147 1175 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 GRIK4Q16099 956 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 TCTN1Q2MV58 587 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 LRIT3Q3SXY7 679 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZNF618Q5T7W0 954 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 SWSAP1Q6NVH7 229 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 ABHD15Q6UXT9 468 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 LRRC8DQ7L1W4 858 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 DIS3L2Q8IYB7 885 aaKnown RBP8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 RETREG2Q8NC44 543 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 TMX3Q96JJ7 454 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZSCAN31Q96LW9 406 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 UNC45AQ9H3U1 944 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 SMARCAD1Q9H4L7 1026 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 AZI2Q9H6S1 392 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 ERAP1Q9NZ08 941 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 DDX25Q9UHL0 483 aaKnown RBP8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 TRPC6Q9Y210 931 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 MYH7BA7E2Y1 1941 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 EMSYQ7Z589 1322 aa8.69□□□□□ -1.02
HMGB3P1-201ENST00000393368 CYP3A7-CYP3A51PA0A087WV96 503 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZBBXA8MT70 800 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 CCNT1O60563 726 aaKnown RBP8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 NBNO60934 754 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 ATG7O95352 703 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 INSRRP14616 1297 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 SELPP16109 830 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 ATP4AP20648 1035 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 CYP3A7P24462 503 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 STAT5BP51692 787 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 TRIM29Q14134 588 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 UGCGQ16739 394 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 Q4G0T1 1027 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 MARCH8Q5T0T0 291 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 LRCH2Q5VUJ6 765 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 MIS18BP1Q6P0N0 1132 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 PSRC1Q6PGN9 363 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 NEK8Q86SG6 692 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 SERINC5Q86VE9 423 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 CCDC155Q8N6L0 562 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 ETNPPLQ8TBG4 499 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 CAGE1Q8TC20 777 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 AFAP1L1Q8TED9 768 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 SLC5A5Q92911 643 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 C8orf76Q96K31 380 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 FAM161BQ96MY7 647 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 MBOAT7Q96N66 472 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 LLPHQ9BRT6 129 aaKnown RBP8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 FAM49AQ9H0Q0 323 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZNF302Q9NR11 478 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 TBC1D22BQ9NU19 505 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 TCEAL9Q9UHQ7 104 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 CDH23Q9H251 3354 aa8.68□□□□□ -1.02
HMGB3P1-201ENST00000393368 IGKV6D-21A0A0A0MT36 114 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 GAS7O60861 476 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 PSMD10O75832 226 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 FGBP02675 491 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 ATP2B1P20020 1258 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 PBX2P40425 430 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 ADAM17P78536 824 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 KRT76Q01546 638 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TMEM62Q0P6H9 643 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZNF746Q6NUN9 644 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TMCO2Q7Z6W1 182 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 FAM177A1Q8N128 213 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 FAM184AQ8NB25 1140 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 NRCAMQ92823 1304 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TEKT3Q9BXF9 490 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TANC1Q9C0D5 1861 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 BRMS1Q9HCU9 246 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 DISC1Q9NRI5 854 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 GABBR1Q9UBS5 961 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 TUBE1Q9UJT0 475 aa8.67□□□□□ -1.02
HMGB3P1-201ENST00000393368 IGSF9BQ9UPX0 1349 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 WDR64B1ANS9 1081 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 RSPH10B2B2RC85 870 aa8.66□□□□□ -1.02
HMGB3P1-201ENST00000393368 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms