RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ECT2Q9H8V3 914 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 OVOS2A0A0G2JMS6 1433 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 ABL1P00519 1130 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 MMGT1Q8N4V1 131 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
RTF1-201ENST00000389629 GIMAP8Q8ND71 665 aaPredicted RBP15.46■□□□□ 0.07
RTF1-201ENST00000389629 MDM1Q8TC05 714 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 METTL14Q9HCE5 456 aaKnown RBP15.46■□□□□ 0.07
RTF1-201ENST00000389629 CCDC188H7C350 402 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 DRP2Q13474 957 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 CLUL1Q15846 466 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 C6orf118Q5T5N4 469 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 PAPD7Q5XG87 772 aaKnown RBP15.46■□□□□ 0.07
RTF1-201ENST00000389629 SPATA24Q86W54 205 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 ZNF512BQ96KM6 892 aaPredicted RBP15.46■□□□□ 0.07
RTF1-201ENST00000389629 DNAJC7Q99615 494 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 DONSONQ9NYP3 566 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 PSMD2Q13200 908 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 SYNCQ9H7C4 482 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 ETNK1Q9HBU6 452 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 TMEM260Q9NX78 707 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 SCOCQ9UIL1 159 aa15.46■□□□□ 0.07
RTF1-201ENST00000389629 RAD51CO43502 376 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 NAIF1Q69YI7 327 aaPredicted RBP15.45■□□□□ 0.06
RTF1-201ENST00000389629 RAB3IL1Q8TBN0 382 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
RTF1-201ENST00000389629 PNMA2Q9UL42 364 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 PCDHA6Q9UN73 950 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 PCDHA8Q9Y5H6 950 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 SART1O43290 800 aaKnown RBP15.45■□□□□ 0.06
RTF1-201ENST00000389629 SYF2O95926 243 aaKnown RBP15.45■□□□□ 0.06
RTF1-201ENST00000389629 MFSD14BQ5SR56 506 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 KIF2BQ8N4N8 673 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 RILPQ96NA2 401 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 TMEM47Q9BQJ4 181 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 CCSER1Q9C0I3 900 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 GCNT4Q9P109 453 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 LOC102724428A0A0B4J2F2 783 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 ATP2A2P16615 1042 aaKnown RBP15.45■□□□□ 0.06
RTF1-201ENST00000389629 SLC16A2P36021 539 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 SIK1P57059 783 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 TMED2Q15363 201 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 NSMCE1Q8WV22 266 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 ARHGAP42A6NI28 874 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 STAMBPO95630 424 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 PLA2G4BP0C869 781 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 FERP16591 822 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 MSH2P43246 934 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 CEP128Q6ZU80 1094 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 OSBPL1AQ9BXW6 950 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 GLT8D2Q9H1C3 349 aa15.45■□□□□ 0.06
RTF1-201ENST00000389629 DDX39AO00148 427 aaKnown RBP15.44■□□□□ 0.06
RTF1-201ENST00000389629 HSPA1LP34931 641 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
RTF1-201ENST00000389629 TXLNGQ9NUQ3 528 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 NOC2LQ9Y3T9 749 aaKnown RBP15.44■□□□□ 0.06
RTF1-201ENST00000389629 WDR91A4D1P6 747 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 ATF2P15336 505 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 SMTNP53814 917 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 USP37Q86T82 979 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 GUF1Q8N442 669 aaKnown RBP15.44■□□□□ 0.06
RTF1-201ENST00000389629 FAM237AA0A1B0GTK4 181 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 ADCY2Q08462 1091 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 ARHGEF18Q6ZSZ5 1173 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 PHLDB2Q86SQ0 1253 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 PITPNM3Q9BZ71 974 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 BARHL2Q9NY43 387 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 PVALEFA0A1B0GWK0 134 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 ZSCAN5CA6NGD5 496 aaPredicted RBP15.44■□□□□ 0.06
RTF1-201ENST00000389629 CFAP157Q5JU67 520 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 VCX3BQ9H321 246 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 NOD2Q9HC29 1040 aa15.44■□□□□ 0.06
RTF1-201ENST00000389629 PAX7P23759 505 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PMS2P54278 862 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PDCD7Q8N8D1 485 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 PRMT1Q99873 361 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 TTI1O43156 1089 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PRPF6O94906 941 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 CHN1P15882 459 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 LMNB1P20700 586 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 KCNH2Q12809 1159 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 TROAPQ12815 778 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 SLMAPQ14BN4 828 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 KIFAP3Q92845 792 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PFDN1O60925 122 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 PMS1P54277 932 aaKnown RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 C10orf76Q5T2E6 689 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 KDM7AQ6ZMT4 941 aa15.43■□□□□ 0.06
RTF1-201ENST00000389629 GBP7Q8N8V2 638 aaPredicted RBP15.43■□□□□ 0.06
RTF1-201ENST00000389629 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms