RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ABCF3Q9NUQ8 709 aa16.02■□□□□ 0.16
VPS9D1-201ENST00000389386 LRP2BPQ9P2M1 347 aa16.02■□□□□ 0.16
VPS9D1-201ENST00000389386 NAB2Q15742 525 aa16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 SCFD2Q8WU76 684 aa16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 ATXN2LQ8WWM7 1075 aaKnown RBP16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 ZNF512BQ96KM6 892 aaPredicted RBP16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 TSC22D3Q99576 134 aa16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 ELAC2Q9BQ52 826 aaKnown RBP16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 PACSIN2Q9UNF0 486 aaPredicted RBP16.02■□□□□ 0.15
VPS9D1-201ENST00000389386 DPPA5A6NC42 116 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 RBAK-RBAKDNI3L0D1 243 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 GNAT1P11488 350 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 CHN1P15882 459 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 FUT2Q10981 343 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 GNPTABQ3T906 1256 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 TMC3Q7Z5M5 1100 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 BAP1Q92560 729 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 NAPBQ9H115 298 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 RPS6KL1Q9Y6S9 549 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 F8VZ95 297 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 IGF2BP3O00425 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 EVI5O60447 810 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 UBOX5O94941 541 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 UPP2O95045 317 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 MMEP08473 750 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 PSMD2Q13200 908 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 ADGRA1Q86SQ6 560 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 STAG2Q8N3U4 1231 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 DISC1Q9NRI5 854 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
VPS9D1-201ENST00000389386 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 BICDL2A1A5D9 508 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 A8MUI8 341 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 MCM7P33993 719 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 GCLCP48506 637 aaPredicted RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 HGSNATQ68CP4 663 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 PROM2Q8N271 834 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 NAF1Q96HR8 494 aaKnown RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 MMRN2Q9H8L6 949 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 ECT2Q9H8V3 914 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 ADAM22Q9P0K1 906 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 SAMD15Q9P1V8 674 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 APBA3O96018 575 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 KRT16P08779 473 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 ATP2A2P16615 1042 aaKnown RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 KLRK1P26718 216 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 GALNTL6Q49A17 601 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
VPS9D1-201ENST00000389386 ANKRD27Q96NW4 1050 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
VPS9D1-201ENST00000389386 KIF4AO95239 1232 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 SEPT2Q15019 361 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 TAF11Q15544 211 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 VWA3BQ502W6 1294 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 MTA3Q9BTC8 594 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 ADAM7Q9H2U9 754 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 CES2O00748 559 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 SMIM24O75264 130 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 MYL1P05976 194 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 DHX9Q08211 1270 aaKnown RBP15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 PDXDC1Q6P996 788 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 GALNT15Q8N3T1 639 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
VPS9D1-201ENST00000389386 CHD4Q14839 1912 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 SPDYE3A6NKU9 549 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 EIF4E1BA6NMX2 242 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 DAPK3O43293 454 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 KLRC1P26715 233 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 MMP13P45452 471 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 TRAPPC10P48553 1259 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 ZNF131P52739 623 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 PPP2R5BQ15173 497 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 CYP7A1P22680 504 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 KIF5BP33176 963 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 RFC4P35249 363 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 MTHFD1LQ6UB35 978 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 ZFAND2BQ8WV99 257 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 PBKQ96KB5 322 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms