RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 PRR36Q9H6K5 1346 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 IPO5O00410 1097 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 RTCAO00442 366 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 CCND1P24385 295 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 RECQLP46063 649 aaPredicted RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 LLGL1Q15334 1064 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 CCNG2Q16589 344 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 ENOSF1Q7L5Y1 443 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 CATSPER4Q7RTX7 472 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 CMTR2Q8IYT2 770 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 LRRC47Q8N1G4 583 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TEX9Q8N6V9 391 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 NAT8LQ8N9F0 302 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SLC16A10Q8TF71 515 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 HDAC2Q92769 488 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TBCBQ99426 244 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 MRPL9Q9BYD2 267 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SUV39H2Q9H5I1 410 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SEL1LQ9UBV2 794 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TRAK1Q9UPV9 953 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 NUDCQ9Y266 331 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 KNSTRNQ9Y448 316 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 EML1O00423 815 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 PES1O00541 588 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 LY75O60449 1722 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 DNTTP04053 509 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 PYGMP11217 842 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 RLBP1P12271 317 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 ATP1A3P13637 1013 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 MSX1P28360 303 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 UBASH3AP57075 661 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TERF2Q15554 542 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TPTE2Q6XPS3 522 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SAPCD2Q86UD0 394 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 TEX11Q8IYF3 940 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 FAM156AQ8NDB6 213 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SLC7A14Q8TBB6 771 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 SNX29Q8TEQ0 813 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 ZDHHC1Q8WTX9 485 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 BORCS6Q96GS4 357 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 MENTQ9BUN1 341 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 LMAN2LQ9H0V9 348 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 ITM2CQ9NQX7 267 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 COMMD8Q9NX08 183 aa6.53□□□□□ -1.36
ERCC4-202ENST00000389138 RRP15Q9Y3B9 282 aaKnown RBP6.53□□□□□ -1.36
ERCC4-202ENST00000389138 CICQ96RK0 1608 aaPredicted RBP6.52□□□□□ -1.36
ERCC4-202ENST00000389138 SMG6Q86US8 1419 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ERICH4A6NGS2 130 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TERTO14746 1132 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 NPTXRO95502 500 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ITGA6P23229 1130 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 HPDP32754 393 aaPredicted RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 FCGRTP55899 365 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PDCD2Q16342 344 aaPredicted RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ITPRIPL1Q6GPH6 555 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 AGMOQ6ZNB7 445 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 AHI1Q8N157 1196 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PRAM1Q96QH2 718 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 RMDN3Q96TC7 470 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TTLL2Q9BWV7 592 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 RANBP17Q9H2T7 1088 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 HELLSQ9NRZ9 838 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PDRG1Q9NUG6 133 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 USP20Q9Y2K6 914 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ABCC6O95255 1503 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 K7ESF4 209 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 EREGO14944 169 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 IPO8O15397 1037 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PCDHGA12O60330 932 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 CTNND1O60716 968 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 JMJD7P0C870 316 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 RPS6KB1P23443 525 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 GUCY2CP25092 1073 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ZYXQ15942 572 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TMCO3Q6UWJ1 677 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 MARCH10Q8NA82 808 aaPredicted RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TTC16Q8NEE8 873 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 NANOS1Q8WY41 292 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TAF4BQ92750 862 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 USP7Q93009 1102 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 AIDAQ96BJ3 306 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 GAS2L1Q99501 681 aaPredicted RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 KATNAL1Q9BW62 490 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 CHRDQ9H2X0 955 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 JAG2Q9Y219 1238 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 POLHQ9Y253 713 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PCDHGA9Q9Y5G4 932 aaKnown RBP6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
ERCC4-202ENST00000389138 PCDHGA7Q9Y5G6 932 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms