RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GOLGA8KD6RF30 607 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 ZNF500O60304 480 aaPredicted RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 APBA1Q02410 837 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 RBL2Q08999 1139 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 NFX1Q12986 1120 aaKnown RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 CASQ2O14958 399 aaPredicted RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 CD2BP2O95400 341 aaKnown RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 SRGAP2BP0DMP2 458 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 DDIT3P35638 169 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 GNGT1P63211 74 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 MAP3K21Q5TCX8 1036 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 WDR46O15213 610 aaKnown RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 RESTQ13127 1097 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 TMEM47Q9BQJ4 181 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 RPF1Q9H9Y2 349 aaKnown RBP16.12■□□□□ 0.17
SNPH-202ENST00000381873 JRKLQ9Y4A0 524 aa16.12■□□□□ 0.17
SNPH-202ENST00000381873 ENC1O14682 589 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 GPC4O75487 556 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 CTTNQ14247 550 aaKnown RBP16.11■□□□□ 0.17
SNPH-202ENST00000381873 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 C11orf57Q6ZUT1 292 aaPredicted RBP16.11■□□□□ 0.17
SNPH-202ENST00000381873 FAM133AQ8N9E0 248 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 RMDN3Q96TC7 470 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 ZBTB5O15062 677 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 RCAN1P53805 252 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 FAM49AQ9H0Q0 323 aaPredicted RBP16.11■□□□□ 0.17
SNPH-202ENST00000381873 SAMSN1Q9NSI8 373 aaKnown RBP16.11■□□□□ 0.17
SNPH-202ENST00000381873 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 ARHGEF28Q8N1W1 1705 aaKnown RBP16.11■□□□□ 0.17
SNPH-202ENST00000381873 ATP1A2P50993 1020 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 OR6B2Q6IFH4 312 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 CATSPER4Q7RTX7 472 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 C2orf69Q8N8R5 385 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 FAM114A2Q9NRY5 505 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
SNPH-202ENST00000381873 HSPA6P17066 643 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 CD58P19256 250 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 ECE1P42892 770 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 SGO2Q562F6 1265 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 PAGE5Q96GU1 130 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 CALN1Q9BXU9 219 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 POC1B-GALNT4F8VUJ3 575 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
SNPH-202ENST00000381873 TXNDC9O14530 226 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 MCF2LO15068 1137 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 LARGE1O95461 756 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 CYP2D6P10635 497 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 SATB1Q01826 763 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 SIX6OS1Q8N1H7 587 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
SNPH-202ENST00000381873 CDC25BP30305 580 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 ARPP19P56211 112 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 PEX3P56589 373 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 CCDC170Q8IYT3 715 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 DNAAF3Q8N9W5 541 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 MCPH1Q8NEM0 835 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
SNPH-202ENST00000381873 MSTO1Q9BUK6 570 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 MED4Q9NPJ6 270 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 BUB1BO60566 1050 aaPredicted RBP16.1■□□□□ 0.17
SNPH-202ENST00000381873 ACTN1P12814 892 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 MARK3P27448 753 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 JAK3P52333 1124 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 STXBP2Q15833 593 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 GAS2L3Q86XJ1 694 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 WRNIP1Q96S55 665 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 NRBP1Q9UHY1 535 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 CNTNAP4Q9C0A0 1308 aa16.1■□□□□ 0.17
SNPH-202ENST00000381873 A0A087WWV3 80 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 SNAP25P60880 206 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 CCDC38Q502W7 563 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 BAIAP2L1Q9UHR4 511 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 TCP11Q8WWU5 503 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 HINFPQ9BQA5 517 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 LDHAP00338 332 aaKnown RBP16.09■□□□□ 0.17
SNPH-202ENST00000381873 ELF1P32519 619 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 RYBPQ8N488 228 aaPredicted RBP16.09■□□□□ 0.17
SNPH-202ENST00000381873 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 C10orf76Q5T2E6 689 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
SNPH-202ENST00000381873 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 LRRC8CQ8TDW0 803 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
SNPH-202ENST00000381873 USP17L5A8MUK1 530 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms