RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 CUL1Q13616 776 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 USP38Q8NB14 1042 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 GLG1Q92896 1179 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 CTTNBP2NLQ9P2B4 639 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 CASP7P55210 303 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TRIP13Q15645 432 aaPredicted RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 PKN1Q16512 942 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 PDXDC1Q6P996 788 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TRPM8Q7Z2W7 1104 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TCP11X1B4DZS4 312 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 UBOX5O94941 541 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 EPB41P11171 864 aaKnown RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 FLT3P36888 993 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TAOK1Q7L7X3 1001 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 ARMC9Q7Z3E5 817 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 HOMER3Q9NSC5 361 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 GFPT2O94808 682 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 KCNJ2P63252 427 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 FAM26FQ5R3K3 315 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 STMN4Q9H169 189 aaPredicted RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 CNOT8Q9UFF9 292 aaKnown RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 RASGRF2O14827 1237 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 NKRFO15226 690 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHOX-203ENST00000381578 TRAPPC10P48553 1259 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 DR1Q01658 176 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 SNX1Q13596 522 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 GJA10Q969M2 543 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 CCDC160A6NGH7 325 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 PDE8AO60658 829 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 MEA1Q16626 185 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
SHOX-203ENST00000381578 PLCB1Q9NQ66 1216 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 ABCF3Q9NUQ8 709 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 USH1CQ9Y6N9 552 aa13.22□□□□□ -0.29
SHOX-203ENST00000381578 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
SHOX-203ENST00000381578 PARP4Q9UKK3 1724 aaKnown RBP13.21□□□□□ -0.29
SHOX-203ENST00000381578 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 SPOPO43791 374 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 RASSF9O75901 435 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 RANBP1P43487 201 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 RAD23BP54727 409 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 IL17AQ16552 155 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
SHOX-203ENST00000381578 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 FKBP3Q00688 224 aaKnown RBP13.21□□□□□ -0.29
SHOX-203ENST00000381578 ZRSR2Q15696 482 aaKnown RBP13.21□□□□□ -0.29
SHOX-203ENST00000381578 TMOD4Q9NZQ9 345 aa13.21□□□□□ -0.29
SHOX-203ENST00000381578 ATP2A2P16615 1042 aaKnown RBP13.21□□□□□ -0.3
SHOX-203ENST00000381578 ARL6IP4Q66PJ3 421 aaKnown RBP13.21□□□□□ -0.3
SHOX-203ENST00000381578 DDX12PQ92771 950 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 HOOK2Q96ED9 719 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 ISCUQ9H1K1 167 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 GPCPD1Q9NPB8 672 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.3
SHOX-203ENST00000381578 A8MUI8 341 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 IFI35P80217 286 aaPredicted RBP13.2□□□□□ -0.3
SHOX-203ENST00000381578 RASIP1Q5U651 963 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 BCL9O00512 1426 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 LRRN2O75325 713 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 NR2F2P24468 414 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 GNA11P29992 359 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 PPP1R2P41236 205 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 GNAQP50148 359 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 PMS2P54278 862 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms