RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
APOBEC3F-202ENST00000381565 WNT8BQ93098 351 aa13.15□□□□□ -0.3
APOBEC3F-202ENST00000381565 LENG9Q96B70 501 aa13.15□□□□□ -0.3
APOBEC3F-202ENST00000381565 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
APOBEC3F-202ENST00000381565 KCNJ14Q9UNX9 436 aa13.15□□□□□ -0.3
APOBEC3F-202ENST00000381565 H3BRB1 525 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 GABBR2O75899 941 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 ACRP10323 421 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 CIITAP33076 1130 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 CCL23P55773 120 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 ZNF200P98182 395 aaPredicted RBP13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 PTGISQ16647 500 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 SCLYQ96I15 445 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 PCYT2Q99447 389 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 TRANK1O15050 2925 aa13.14□□□□□ -0.31
APOBEC3F-202ENST00000381565 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 STK25O00506 426 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 CCNE2O96020 404 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 SMIM10L2AP0DMW4 78 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 SMIM10L2BP0DMW5 78 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 RBL2Q08999 1139 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 ZNF365Q70YC5 407 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 C7orf31Q8N865 590 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 BBXQ8WY36 941 aaPredicted RBP13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 UIMC1Q96RL1 719 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
APOBEC3F-202ENST00000381565 LGR5O75473 907 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 ZNF76P36508 570 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 ACTR2P61160 394 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 GALNT17Q6IS24 598 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 TBCKQ8TEA7 893 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
APOBEC3F-202ENST00000381565 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 ATG7O95352 703 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 TDP2O95551 362 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 COL9A1P20849 921 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 ADAM17P78536 824 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 PRR16Q569H4 304 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 TRAF7Q6Q0C0 670 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 ZNF215Q9UL58 517 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 NOD1Q9Y239 953 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
APOBEC3F-202ENST00000381565 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 MSH4O15457 936 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 TREHO43280 583 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 TIE1P35590 1138 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 USP11P51784 963 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 PTK7Q13308 1070 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 GPNMBQ14956 572 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 RABEP1Q15276 862 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 INF2Q27J81 1249 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 AFAP1L1Q8TED9 768 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 ATXN2LQ8WWM7 1075 aaKnown RBP13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
APOBEC3F-202ENST00000381565 CYP3A7-CYP3A51PA0A087WV96 503 aa13.09□□□□□ -0.31
APOBEC3F-202ENST00000381565 CKBP12277 381 aa13.09□□□□□ -0.31
APOBEC3F-202ENST00000381565 CYP3A7P24462 503 aa13.09□□□□□ -0.31
APOBEC3F-202ENST00000381565 MARK3P27448 753 aa13.09□□□□□ -0.31
APOBEC3F-202ENST00000381565 FOSBP53539 338 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms