RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 F5H6K3 240 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 KLRC3Q07444 240 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 KLHL30Q0D2K2 578 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 KNOP1Q1ED39 458 aaKnown RBP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 USH1GQ495M9 461 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 STRIP1Q5VSL9 837 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
TRIM23-203ENST00000381018 REEP2Q9BRK0 252 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 STIM2Q9P246 746 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
TRIM23-203ENST00000381018 MYH11P35749 1972 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 NDUFB10O96000 172 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 GGCXP38435 758 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 MMP14P50281 582 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 CASP5P51878 434 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 SNAP25P60880 206 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 PSMC6P62333 389 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 APBA1Q02410 837 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 ARID5AQ03989 594 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 GLE1Q53GS7 698 aaKnown RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 HDAC7Q8WUI4 952 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 LENG9Q96B70 501 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 KCNQ5Q9NR82 932 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 SMARCAL1Q9NZC9 954 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 DMGDHQ9UI17 866 aaKnown RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 GOLGA6BA6NDN3 693 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 FAM86B1E9PN63 330 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 MEIS1O00470 390 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 PDXKO00764 312 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 PALMO75781 387 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 GDF11O95390 407 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 IVLP07476 585 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 FAM86B2P0C5J1 330 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 TNFRSF8P28908 595 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 CIITAP33076 1130 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 SND1Q7KZF4 910 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 PLCB1Q9NQ66 1216 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 RBM12Q9NTZ6 932 aaKnown RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
TRIM23-203ENST00000381018 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
TRIM23-203ENST00000381018 A0A087X0T9 212 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 FAM228BP0C875 321 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 BMP3P12645 472 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 KLRC1P26715 233 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 EPHB4P54760 987 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 EMBQ6PCB8 327 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 SERPINA10Q9UK55 444 aa13.09□□□□□ -0.31
TRIM23-203ENST00000381018 AGPSO00116 658 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 MSH4O15457 936 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 ECE2O60344 883 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 HOXD13P35453 343 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 BMT2Q1RMZ1 405 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 MEI1Q5TIA1 1274 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 RIN2Q8WYP3 895 aaPredicted RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 POLR3CQ9BUI4 534 aaPredicted RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 TYW1Q9NV66 732 aaKnown RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 ADAMTS1Q9UHI8 967 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
TRIM23-203ENST00000381018 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
TRIM23-203ENST00000381018 BTNL10A8MVZ5 291 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms