RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CYP3A7-CYP3A51PA0A087WV96 503 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 PDHXO00330 501 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 CYP3A7P24462 503 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 NLRP5P59047 1200 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 NOGQ13253 232 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 SPATA1Q5VX52 437 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 GPKOWQ92917 476 aaPredicted RBP eCLIP8.64□□□□□ -1.03
CDKL5-202ENST00000379996 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 GSDMAQ96QA5 445 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 PLXNA1Q9UIW2 1896 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 PFASO15067 1338 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 BMP15O95972 392 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 GYPCP04921 128 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 MAP2K2P36507 400 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 XRRA1Q6P2D8 792 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 P2RX7Q99572 595 aaKnown RBP8.64□□□□□ -1.03
CDKL5-202ENST00000379996 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-202ENST00000379996 MROH8Q9H579 483 aa8.64□□□□□ -1.03
CDKL5-202ENST00000379996 CASP8AP2Q9UKL3 1982 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 KIF20AO95235 890 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SERPINC1P01008 464 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 CASP1P29466 404 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 MTF1Q14872 753 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 TERF2Q15554 542 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 FAM110CQ1W6H9 321 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 IRF2BP1Q8IU81 584 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 PSTPIP2Q9H939 334 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 RBPJLQ9UBG7 517 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 CCPG1Q9ULG6 757 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SYNRGQ9UMZ2 1314 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 LAD1O00515 517 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 LILRB3O75022 631 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 CIITAP33076 1130 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SREBF1P36956 1147 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 USP11P51784 963 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 PPP4R3AQ6IN85 833 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 TATDN2Q93075 761 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SPATC1LQ9H0A9 340 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 BTBD7Q9P203 1132 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 HOXA2O43364 376 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 MFAP3LO75121 409 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SASH3O75995 380 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 BCRP11274 1271 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 ADKP55263 362 aaKnown RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
CDKL5-202ENST00000379996 NIPA1Q7RTP0 329 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 MORC4Q8TE76 937 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 COA7Q96BR5 231 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 ACAD9Q9H845 621 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 VAT1LQ9HCJ6 419 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 SAGE1Q9NXZ1 904 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
CDKL5-202ENST00000379996 KLRC4O43908 158 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 PNMA6AP0CW24 399 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-202ENST00000379996 GCFC2P16383 781 aaKnown RBP8.62□□□□□ -1.03
CDKL5-202ENST00000379996 STAT3P40763 770 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 ARHGAP25P42331 645 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 FAM193AP78312 1265 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 SOWAHDA6NJG2 315 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 GCOM1H8Y6P7 765 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-202ENST00000379996 STAM2O75886 525 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 TBC1D8O95759 1140 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 POLR2MP0CAP2 368 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 ERVK-24P63145 666 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 DEFB115Q30KQ5 88 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 KRT222Q8N1A0 295 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 DNERQ8NFT8 737 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
CDKL5-202ENST00000379996 NAA15Q9BXJ9 866 aaKnown RBP8.62□□□□□ -1.03
CDKL5-202ENST00000379996 DNAJC25-GNG10A0A024R161 153 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 hCG_1642624A0A1W2PR95 340 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 IGF2BP3O00425 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDKL5-202ENST00000379996 ZSCAN12O43309 604 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 SLC26A4O43511 780 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 FXR1P51114 621 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDKL5-202ENST00000379996 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 CCNA1P78396 465 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 RBL2Q08999 1139 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 NONOQ15233 471 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDKL5-202ENST00000379996 Q4G0T1 1027 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 TMEM259Q4ZIN3 620 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 C17orf99Q6UX52 265 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
CDKL5-202ENST00000379996 RAVER2Q9HCJ3 691 aaKnown RBP8.61□□□□□ -1.03
CDKL5-202ENST00000379996 HOOK1Q9UJC3 728 aaKnown RBP8.61□□□□□ -1.03
CDKL5-202ENST00000379996 SMCHD1A6NHR9 2005 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms