RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 KRIT1O00522 736 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 DAPK3O43293 454 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 PPFIA2O75334 1257 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 ANXA13P27216 316 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 PDIA5Q14554 519 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 METTL13Q8N6R0 699 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 ANKS4BQ8N8V4 417 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 MAB21L3Q8N8X9 362 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 DDX12PQ92771 950 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 CUL5Q93034 780 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 FAM84BQ96KN1 310 aaPredicted RBP17.54■□□□□ 0.4
C19orf54-201ENST00000378313 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
C19orf54-201ENST00000378313 SMCO2A6NFE2 343 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 DCDC2CA8MYV0 355 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 TXKP42681 527 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 E2F5Q15329 346 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 LMBR1Q8WVP7 490 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 ZNF317Q96PQ6 595 aaPredicted RBP17.53■□□□□ 0.4
C19orf54-201ENST00000378313 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 TXLNGYQ9BZA5 131 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 DDX47Q9H0S4 455 aaKnown RBP17.53■□□□□ 0.4
C19orf54-201ENST00000378313 SLC12A4Q9UP95 1085 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.4
C19orf54-201ENST00000378313 OPLAHO14841 1288 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 DHX9Q08211 1270 aaKnown RBP17.53■□□□□ 0.4
C19orf54-201ENST00000378313 LRRC41Q15345 812 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 TMEM119Q4V9L6 283 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 SLFN11Q7Z7L1 901 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 HOOK3Q86VS8 718 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 TBCKQ8TEA7 893 aa17.53■□□□□ 0.4
C19orf54-201ENST00000378313 SUCLA2Q9P2R7 463 aaPredicted RBP17.53■□□□□ 0.4
C19orf54-201ENST00000378313 CALCRLQ16602 461 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 PIGWQ7Z7B1 504 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 EBF2Q9HAK2 575 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■□□□ 11.6
C19orf54-201ENST00000378313 STXBP5LQ9Y2K9 1186 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 UTP11Q9Y3A2 253 aaKnown RBP17.52■□□□□ 0.4
C19orf54-201ENST00000378313 CFAP73A6NFT4 308 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 BACH1O14867 736 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 NTSR2O95665 410 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 C12orf60Q5U649 245 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 IRF2BP2Q7Z5L9 587 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 TPCN2Q8NHX9 752 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 RSRC1Q96IZ7 334 aaKnown RBP17.52■□□□□ 0.4
C19orf54-201ENST00000378313 MCM9Q9NXL9 1143 aa17.52■□□□□ 0.4
C19orf54-201ENST00000378313 A0A0A6YYK5 440 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ARID5AQ03989 594 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 PTK2Q05397 1052 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 COASYQ13057 564 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 FBXO33Q7Z6M2 555 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ZC3H3Q8IXZ2 948 aaKnown RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 GLIS3Q8NEA6 775 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 BATF3Q9NR55 127 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 AMACRQ9UHK6 382 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ATP2C2O75185 946 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 GBP2P32456 591 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 HIBCHQ6NVY1 386 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 CTNND1O60716 968 aaKnown RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 NUDT17P0C025 328 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 NPEPPSP55786 919 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 NAIF1Q69YI7 327 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 ZNF571Q7Z3V5 609 aaPredicted RBP17.51■□□□□ 0.39
C19orf54-201ENST00000378313 SYCE1Q8N0S2 351 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 CCDC63Q8NA47 563 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 PGM2Q96G03 612 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 NAGPAQ9UK23 515 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 NENFQ9UMX5 172 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
C19orf54-201ENST00000378313 KIF13BQ9NQT8 1826 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 COL4A1P02462 1669 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 POU5F1Q01860 360 aaKnown RBP17.5■□□□□ 0.39
C19orf54-201ENST00000378313 KRT79Q5XKE5 535 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
C19orf54-201ENST00000378313 INTUQ9ULD6 942 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 TTI1O43156 1089 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 ITGA4P13612 1032 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 MMP13P45452 471 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 FAM26FQ5R3K3 315 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 CCDC134Q9H6E4 229 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 SLC24A3Q9HC58 644 aa17.5■□□□□ 0.39
C19orf54-201ENST00000378313 IBSPP21815 317 aaPredicted RBP17.49■□□□□ 0.39
C19orf54-201ENST00000378313 PRKCIP41743 596 aa17.49■□□□□ 0.39
C19orf54-201ENST00000378313 SLMAPQ14BN4 828 aa17.49■□□□□ 0.39
C19orf54-201ENST00000378313 PPP2R5EQ16537 467 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms