RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TYW5A2RUC4 315 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SNX1Q13596 522 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TCEAL1Q15170 157 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 E4F1Q66K89 784 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CYP26B1Q9NR63 512 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PARVAQ9NVD7 372 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SMCO2A6NFE2 343 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ECEL1O95672 775 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RARGP13631 454 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TGFB3P10600 412 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 JAK3P52333 1124 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 BEND6Q5SZJ8 279 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SH3GL3Q99963 347 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FUT8Q9BYC5 575 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PNMA3Q9UL41 463 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 NEXMIFQ5QGS0 1516 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 XDHP47989 1333 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TOB2Q14106 344 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RBM46Q8TBY0 533 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ECM2O94769 699 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PTH1RQ03431 593 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TMEM126BQ8IUX1 230 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SUCLG2Q96I99 432 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PLA2G6O60733 806 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ZFYVE27Q5T4F4 411 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 GUCY2CP25092 1073 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CLCN6P51797 869 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 G2E3Q7L622 706 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CPDO75976 1380 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PJA2O43164 708 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TBX2Q13207 712 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SPARCL1Q14515 664 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 NGLY1Q96IV0 654 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TARBP1Q13395 1621 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 USP17L12C9JPN9 530 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 USP17L21D6R901 530 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TMOD1P28289 359 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CFAP74Q9C0B2 1584 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SLC15A2Q16348 729 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 YIPF3Q9GZM5 350 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CCT6AP40227 531 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ABCE1P61221 599 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TRIM6Q9C030 488 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PANK4Q9NVE7 773 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 A8MXQ7 604 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SPOPO43791 374 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 H2AFYO75367 372 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 KCNA4P22459 653 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PDP2Q9P2J9 529 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 BTBD18B2RXH4 712 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CDC27P30260 824 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ADCY8P40145 1251 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 IFT81Q8WYA0 676 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FAM167AQ96KS9 214 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FBXO40Q9UH90 709 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 OAS2P29728 719 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ELF2Q15723 593 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ANKRD20A4Q4UJ75 823 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ANKRD20A8PQ5CZ79 823 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ANKRD20A2Q5SQ80 823 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ANKRD20A1Q5TYW2 823 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 EFHBQ8N7U6 833 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FAM169AQ9Y6X4 670 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 KRT10P13645 584 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 KRT35Q92764 455 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 DBNDD2Q9BQY9 259 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 GOLPH3LQ9H4A5 285 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 POLE3Q9NRF9 147 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 KBTBD13C9JR72 458 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SERPINB9P50453 376 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RFFLQ8WZ73 363 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 DCLRE1BQ9H816 532 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 IQANK1A0A1B0GTG1 560 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 TRIM55Q9BYV6 548 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 YY1P25490 414 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SLC1A4P43007 532 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 MARSP56192 900 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CWF19L2Q2TBE0 894 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RAB3IL1Q8TBN0 382 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 MRPL44Q9H9J2 332 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 UNC13BO14795 1591 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SPDYE4A6NLX3 237 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 SSBP05455 408 aaKnown RBP eCLIP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 NAB1Q13506 487 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ARID5BQ14865 1188 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 PHF20Q9BVI0 1012 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ANGPTL2Q9UKU9 493 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 ZNF532Q9HCE3 1301 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 IRAK1P51617 712 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 TFAP4Q01664 338 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 TMTC3Q6ZXV5 915 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 VPS9D1Q9Y2B5 631 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 EXOC3O60645 756 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 HADHBP55084 474 aaKnown RBP5.32□□□□□ -1.56
PCDH9-201ENST00000377861 CDKAL1Q5VV42 579 aa5.32□□□□□ -1.56
PCDH9-201ENST00000377861 UTP6Q9NYH9 597 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms