RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 TXNRD3Q86VQ6 643 aa14.5□□□□□ -0.09
DFFA-202ENST00000377038 THNSL1Q8IYQ7 743 aa14.5□□□□□ -0.09
DFFA-202ENST00000377038 LXNQ9BS40 222 aa14.5□□□□□ -0.09
DFFA-202ENST00000377038 VCPKMTQ9H867 229 aa14.5□□□□□ -0.09
DFFA-202ENST00000377038 GFPT2O94808 682 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 TGFB2P61812 414 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 GABPAQ06546 454 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 TCP11X2Q5H9J9 407 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 NEK9Q8TD19 979 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 TAF6LQ9Y6J9 622 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 CD58P19256 250 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 CASC4Q6P4E1 433 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 RSAD2Q8WXG1 361 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 NDST4Q9H3R1 872 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 MYO5BQ9ULV0 1848 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 ZNF233A6NK53 670 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 IFNB1P01574 187 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 GNAT1P11488 350 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 MTRQ99707 1265 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 CCDC94Q9BW85 323 aaPredicted RBP14.49□□□□□ -0.09
DFFA-202ENST00000377038 TEX13BQ9BXU2 312 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 PRR12Q9ULL5 1215 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 RNF8O76064 485 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 MYO1EQ12965 1108 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 POLRMTO00411 1230 aaKnown RBP14.49□□□□□ -0.09
DFFA-202ENST00000377038 KRIT1O00522 736 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 SLC16A4O15374 487 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 CSPG5O95196 566 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
DFFA-202ENST00000377038 SCARA5Q6ZMJ2 495 aa14.49□□□□□ -0.09
DFFA-202ENST00000377038 COASYQ13057 564 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 ADAT2Q7Z6V5 191 aaKnown RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 ARFGAP2Q8N6H7 521 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 PPP4CP60510 307 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 IRX5P78411 483 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 HDLBPQ00341 1268 aaKnown RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 BSPRYQ5W0U4 402 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 C7orf31Q8N865 590 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 EIF2AK1Q9BQI3 630 aaKnown RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 PHF20Q9BVI0 1012 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 PSMC5P62195 406 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 ATP2C1P98194 919 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 MESDQ14696 234 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 SURF1Q15526 300 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 PRMT6Q96LA8 375 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 FAM81BQ96LP2 452 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 TRIM49BA6NDI0 452 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 ASB14A6NK59 587 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 FGFR2P21802 821 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 PAK2Q13177 524 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 CEP55Q53EZ4 464 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 FMR1NBQ8N0W7 255 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 RRAGDQ9NQL2 400 aaPredicted RBP14.48□□□□□ -0.09
DFFA-202ENST00000377038 HAUS2Q9NVX0 235 aa14.48□□□□□ -0.09
DFFA-202ENST00000377038 TNPO2O14787 897 aaKnown RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 ATP1A3P13637 1013 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 BAATQ14032 418 aaPredicted RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 KRT31Q15323 416 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 TAF1CQ15572 869 aaPredicted RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 MAPK6Q16659 721 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 ZNF653Q96CK0 615 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 ATP5DP30049 168 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 MFSD14CQ5VZR4 134 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 FEZ2Q9UHY8 353 aaPredicted RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 FAM205CA6NFA0 338 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 IVLP07476 585 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 U2AF2P26368 475 aaKnown RBP eCLIP14.47□□□□□ -0.09
DFFA-202ENST00000377038 HOXD10P28358 340 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 HPDP32754 393 aaPredicted RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 ARPP19P56211 112 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 RHPN2Q8IUC4 686 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 NKIRAS1Q9NYS0 192 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 MYO1FO00160 1098 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 CLDN3O15551 220 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 PHKA2P46019 1235 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 WHAMMP3Q1A5X7 153 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 ZBTB16Q05516 673 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 ITIH3Q06033 890 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 KAZNQ674X7 775 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 PSPC1Q8WXF1 523 aaKnown RBP14.47□□□□□ -0.09
DFFA-202ENST00000377038 RAB17Q9H0T7 212 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 SLC9A2Q9UBY0 812 aa14.47□□□□□ -0.09
DFFA-202ENST00000377038 LDHAP00338 332 aaKnown RBP14.46□□□□□ -0.09
DFFA-202ENST00000377038 MXRA7P84157 204 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 EHHADHQ08426 723 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 KIAA1841Q6NSI8 718 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 FAM149B1Q96BN6 582 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 ZNF668Q96K58 619 aaPredicted RBP14.46□□□□□ -0.09
DFFA-202ENST00000377038 GOLGA8SH3BPF8 625 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 ANAPC4Q9UJX5 808 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 PVALEFA0A1B0GWK0 134 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 DENND3A2RUS2 1198 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 VSTM4Q8IW00 320 aa14.46□□□□□ -0.09
DFFA-202ENST00000377038 POLR3FQ9H1D9 316 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms