RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SART1O43290 800 aaKnown RBP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 SLC37A4O43826 429 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 ACTN1P12814 892 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 NF2P35240 595 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 PPP2R2AP63151 447 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 NONOQ15233 471 aaKnown RBP eCLIP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 SCFD2Q8WU76 684 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 LARP4BQ92615 738 aaKnown RBP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 EDIL3O43854 480 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 LRIG3Q6UXM1 1119 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 NEK8Q86SG6 692 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
TM9SF2-201ENST00000376387 PPP1R2P41236 205 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 CAVIN4Q5BKX8 364 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 ZMYND12Q9H0C1 365 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 TDP2O95551 362 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 PTK2Q05397 1052 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 LRRC63Q05C16 580 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 TATDN2Q93075 761 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 MIEF2Q96C03 454 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 TMEM47Q9BQJ4 181 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 DPH5Q9H2P9 285 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
TM9SF2-201ENST00000376387 A0A0G2JS52 829 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 TTI1O43156 1089 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 PPP1R12BO60237 982 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 RPSAP08865 295 aaKnown RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 DGKHQ86XP1 1220 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ARFGAP2Q8N6H7 521 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 TAF4BQ92750 862 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 TRIM31Q9BZY9 425 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ACTR5Q9H9F9 607 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 SUGT1Q9Y2Z0 365 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 NOC2LQ9Y3T9 749 aaKnown RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 BCL9O00512 1426 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 DRD4P21917 467 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 DRP2Q13474 957 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ZCWPW2Q504Y3 356 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 SLC51AQ86UW1 340 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 CCT6BQ92526 530 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 TBC1D31Q96DN5 1066 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 PVALEFA0A1B0GWK0 134 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 UBAP2Q5T6F2 1119 aaKnown RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 RAD54LQ92698 747 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 MTMR9Q96QG7 549 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 NR2E1Q9Y466 385 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 ABCB11O95342 1321 aa12.56□□□□□ -0.4
TM9SF2-201ENST00000376387 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CCDC189A1A4V9 331 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 C5orf60A6NFR6 353 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 COPB2P35606 906 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CPLX4Q7Z7G2 160 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 EDEM3Q9BZQ6 932 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 MTFR1LQ9H019 292 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 SRRM3A6NNA2 597 aaPredicted RBP12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 BHMG1C9JSJ3 638 aaPredicted RBP12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 SHBGP04278 402 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 USP11P51784 963 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 COASYQ13057 564 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CUL1Q13616 776 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 ASIC2Q16515 512 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 CALCRLQ16602 461 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 KRT71Q3SY84 523 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 KRT25Q7Z3Z0 450 aa12.55□□□□□ -0.4
TM9SF2-201ENST00000376387 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms