RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GOLGA8JA6NMD2 632 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 AFPP02771 609 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 NMT1P30419 496 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ZKSCAN8Q15776 578 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ZC2HC1CQ53FD0 456 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 EMBQ6PCB8 327 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FAM178BQ8IXR5 827 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 RBM17Q96I25 401 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ADAM33Q9BZ11 813 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CALUO43852 315 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 RPSAP08865 295 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MYBP10242 640 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 KRT5P13647 590 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CASP4P49662 377 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 GRIPAP1Q4V328 841 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MIIPQ5JXC2 388 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 EFCAB13Q8IY85 973 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TLR10Q9BXR5 811 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 BCL9O00512 1426 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TTI1O43156 1089 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CETN1Q12798 172 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 C4orf32Q8N8J7 132 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PNMA5Q96PV4 448 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ERGIC2Q96RQ1 377 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TACO1Q9BSH4 297 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 RABGAP1Q9Y3P9 1069 aa15.7■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SART1O43290 800 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MAGOHP61326 146 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PSMC6P62333 389 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SHROOM1Q2M3G4 852 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SBK1Q52WX2 424 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MAGOHBQ96A72 148 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MAGEF1Q9HAY2 307 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FBXL5Q9UKA1 691 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TCP10L2B9ZVM9 353 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PGRMC1O00264 195 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FAM186BQ8IYM0 893 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 BICD1Q96G01 975 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CEP72Q9P209 647 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ASIC3Q9UHC3 531 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TMEM132AQ24JP5 1023 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FBXO11Q86XK2 927 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MDM1Q8TC05 714 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TMOD2Q9NZR1 351 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ARHGEF35A5YM69 484 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 EIF4E1BA6NMX2 242 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 GAS7O60861 476 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CLTAP09496 248 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ITGA4P13612 1032 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SLC35G1Q2M3R5 365 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ICE2Q659A1 982 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CASKIN2Q8WXE0 1202 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FAM53CQ9NYF3 392 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TBK1Q9UHD2 729 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MYH2Q9UKX2 1941 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 KCNA1Q09470 495 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 NFIAQ12857 509 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CENPPQ6IPU0 288 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TEKT1Q969V4 418 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MMTAG2Q9BU76 263 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PSD3Q9NYI0 1048 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 C5P01031 1676 aa15.68■□□□□ 0.1
TNFRSF1B-201ENST00000376259 RPS6KA4O75676 772 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 KLHDC7AQ5VTJ3 777 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TCP11Q8WWU5 503 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 STK38LQ9Y2H1 464 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 MYH10P35580 1976 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 EIF3HO15372 352 aaKnown RBP eCLIP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 PDE6BP35913 854 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 HDLBPQ00341 1268 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 NOC2LQ9Y3T9 749 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 TARSL2A2RTX5 802 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-201ENST00000376259 ANKRD62A6NC57 917 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms