RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 ZBTB10Q96DT7 871 aa19.64■□□□□ 0.73
TUBGCP3-202ENST00000375669 NOP53Q9NZM5 478 aaKnown RBP19.64■□□□□ 0.73
TUBGCP3-202ENST00000375669 TRAF5O00463 557 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 SLC37A4O43826 429 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 CAMTA2O94983 1202 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 ADAMTS2O95450 1211 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 TDP2O95551 362 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 MAGOHP61326 146 aaKnown RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 MAGOHBQ96A72 148 aaKnown RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 TMEM47Q9BQJ4 181 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 LSM14BQ9BX40 385 aaKnown RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 PAPPAQ13219 1627 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 CUL1Q13616 776 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 GRIK5Q16478 980 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 FAM83BQ5T0W9 1011 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 TBC1D1Q86TI0 1168 aaPredicted RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 ANKS4BQ8N8V4 417 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 SPDYE1Q8NFV5 336 aaPredicted RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 AGAP11Q8TF27 550 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 DDX12PQ92771 950 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 INPP4AQ96PE3 977 aaPredicted RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 NEUROG2Q9H2A3 272 aa19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 CORO1CQ9ULV4 474 aaPredicted RBP19.63■□□□□ 0.73
TUBGCP3-202ENST00000375669 CFAP73A6NFT4 308 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 NOL4O94818 638 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 SNUPNO95149 360 aaKnown RBP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 ACTN1P12814 892 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 RBBP5Q15291 538 aaKnown RBP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 ECM1Q16610 540 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 CDK5RAP3Q96JB5 506 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 CALR3Q96L12 384 aaKnown RBP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 NPHP3-ACAD11A0A0J9YXS1 232 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 CDC25CP30307 473 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 HSPA2P54652 639 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 NONOQ15233 471 aaKnown RBP eCLIP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 TGFBRAP1Q8WUH2 860 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 UBLCP1Q8WVY7 318 aaPredicted RBP19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 PANK4Q9NVE7 773 aa19.62■□□□□ 0.73
TUBGCP3-202ENST00000375669 ERMARDQ5T6L9 678 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 LRRC55Q6ZSA7 311 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 CCDC84Q86UT8 332 aaPredicted RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 MAPKAPK5Q8IW41 473 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 USP38Q8NB14 1042 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 COA7Q96BR5 231 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 PNMA5Q96PV4 448 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 XPO6Q96QU8 1125 aaKnown RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 PIGSQ96S52 555 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 TRIM31Q9BZY9 425 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 ZHX3Q9H4I2 956 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 AP1G2O75843 785 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 MYL1P05976 194 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 ZNF268Q14587 947 aaPredicted RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 NEK8Q86SG6 692 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 GPR101Q96P66 508 aaPredicted RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 DDX47Q9H0S4 455 aaKnown RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 FBXL5Q9UKA1 691 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 CACNA1SQ13698 1873 aa19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 FRMPD2Q68DX3 1309 aaPredicted RBP19.61■□□□□ 0.73
TUBGCP3-202ENST00000375669 DIAPH2O60879 1101 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 AMPD3Q01432 767 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 SLC9C1Q4G0N8 1177 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 SFMBT2Q5VUG0 894 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 FAM43BQ6ZT52 329 aaPredicted RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 DZIP1Q86YF9 867 aaKnown RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 CNOT10Q9H9A5 744 aaKnown RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 CCDC87Q9NVE4 849 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 BCL9O00512 1426 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 PECAM1P16284 738 aaPredicted RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 EIF6P56537 245 aaKnown RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ITPK1Q13572 414 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 MTMR3Q13615 1198 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 GRM4Q14833 912 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ADAT2Q7Z6V5 191 aaKnown RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 MDM1Q8TC05 714 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 CENPTQ96BT3 561 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 PSMD1Q99460 953 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 FAM129AQ9BZQ8 928 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ARPP21Q9UBL0 812 aaPredicted RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 TMEM59LQ9UK28 342 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 CEP104O60308 925 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ALADP13716 330 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ITIH4Q14624 930 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 MEI1Q5TIA1 1274 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 ZNF444Q8N0Y2 327 aaPredicted RBP19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 SH3GLB2Q9NR46 395 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 SLC5A4Q9NY91 659 aa19.6■□□□□ 0.73
TUBGCP3-202ENST00000375669 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 PLCH1Q4KWH8 1693 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 LIN7AO14910 233 aaPredicted RBP19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 CTNND1O60716 968 aaKnown RBP19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 ITGA4P13612 1032 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 SEMA3FQ13275 785 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 SNX29Q8TEQ0 813 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
TUBGCP3-202ENST00000375669 UBE4AQ14139 1066 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms