RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 UBXN6Q9BZV1 441 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
CUL4A-203ENST00000375441 ZSCAN5CA6NGD5 496 aaPredicted RBP14.34□□□□□ -0.11
CUL4A-203ENST00000375441 PLTPP55058 493 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 SNAP25P60880 206 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 LINC00116Q8NCU8 138 aa14.34□□□□□ -0.11
CUL4A-203ENST00000375441 ARHGEF35A5YM69 484 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.11
CUL4A-203ENST00000375441 RAD51CO43502 376 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 PPP1R37O75864 691 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 NFIXQ14938 502 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 MIIPQ5JXC2 388 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.11
CUL4A-203ENST00000375441 FBXO11Q86XK2 927 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 DAAM1Q9Y4D1 1078 aa14.33□□□□□ -0.11
CUL4A-203ENST00000375441 HGSO14964 777 aaPredicted RBP14.33□□□□□ -0.12
CUL4A-203ENST00000375441 ZBTB5O15062 677 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 LRRN2O75325 713 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FGGP02679 453 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 PDHBP11177 359 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 SEC24CP53992 1094 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 NAB2Q15742 525 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 AENQ8WTP8 325 aaKnown RBP14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 TNS2Q63HR2 1409 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 GLI1P08151 1106 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FECHP22830 423 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 CETN2P41208 172 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.124e-6■■□□□ 13.5
CUL4A-203ENST00000375441 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 DDX42Q86XP3 938 aaKnown RBP eCLIP14.33□□□□□ -0.12
CUL4A-203ENST00000375441 OR2W6PQ8NHA6 318 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
CUL4A-203ENST00000375441 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 TLR10Q9BXR5 811 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 AMACRQ9UHK6 382 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 FLT1P17948 1338 aa14.33□□□□□ -0.12
CUL4A-203ENST00000375441 CCDC188H7C350 402 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 BCRP11274 1271 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 SLC9A1P19634 815 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 LSP1P33241 339 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 GJC1P36383 396 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
CUL4A-203ENST00000375441 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 NLRP14Q86W24 1093 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 SART1O43290 800 aaKnown RBP14.32□□□□□ -0.12
CUL4A-203ENST00000375441 TRAF1Q13077 416 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 LLGL1Q15334 1064 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 KLHDC7AQ5VTJ3 777 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 FAM196AQ6ZSG2 479 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 BAIAP2L1Q9UHR4 511 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
CUL4A-203ENST00000375441 DAPK3O43293 454 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
CUL4A-203ENST00000375441 TRIM37O94972 964 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 FGRP09769 529 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 LMNB1P20700 586 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 TSEN2Q8NCE0 465 aaKnown RBP14.32□□□□□ -0.12
CUL4A-203ENST00000375441 MGARPQ8TDB4 240 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 FMO2Q99518 471 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
CUL4A-203ENST00000375441 BACH1O14867 736 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 PSMC2P35998 433 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 IFNAR2P48551 515 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 KNOP1Q1ED39 458 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 MAGOHBQ96A72 148 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 NOC2LQ9Y3T9 749 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 RGPD5Q99666 1765 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 ICA1Q05084 483 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 BLOC1S4Q9NUP1 217 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 FBXL5Q9UKA1 691 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 KCPQ6ZWJ8 1503 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 MEFVO15553 781 aaPredicted RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 GAS7O60861 476 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 NR3C1P04150 777 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 MDH1P40925 334 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 MAGOHP61326 146 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 PTK2Q05397 1052 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
CUL4A-203ENST00000375441 PPP2R5EQ16537 467 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 KIAA0825Q8IV33 1275 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 GLIS3Q8NEA6 775 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 CASKIN2Q8WXE0 1202 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
CUL4A-203ENST00000375441 CCT8L2Q96SF2 557 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms