RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 FAM170AA1A519 330 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PIPSLA2A3N6 862 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CCDC169A6NNP5 214 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SKAP2O75563 359 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RASA1P20936 1047 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 EXOSC10Q01780 885 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ARID5AQ03989 594 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SHROOM1Q2M3G4 852 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SYTL3Q4VX76 610 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PACS2Q86VP3 889 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ZGPATQ8N5A5 531 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 EXD1Q8NHP7 514 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 FAM172AQ8WUF8 416 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HIC2Q96JB3 615 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TRIM33Q9UPN9 1127 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TRAF3IP3Q9Y228 551 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RRP7AQ9Y3A4 280 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 DDX5P17844 614 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SERPINB3P29508 390 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TTC39AQ5SRH9 613 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 BSPRYQ5W0U4 402 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CCSAPQ6IQ19 270 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PEG10Q86TG7 708 aaKnown RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TCAIMQ8N3R3 496 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HIPK4Q8NE63 616 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 OSBPL1AQ9BXW6 950 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 UVRAGQ9P2Y5 699 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 BAIAP2Q9UQB8 552 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 A0A0X1KG70 313 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CCDC194A0A1B0GVG4 234 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TRIM64A6NGJ6 449 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TRIM64BA6NI03 449 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SPDYE16A6NNV3 312 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ESRRAP11474 423 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HSPA6P17066 643 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ACADLP28330 430 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CDC27P30260 824 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ELF1P32519 619 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RPS6KA3P51812 740 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SPDYE2Q495Y8 402 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 MOSPD2Q8NHP6 518 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HMG20AQ9NP66 347 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 BTBD3Q9Y2F9 522 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SMIM31A0A1B0GVY4 71 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 hCG_1642624A0A1W2PR95 340 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 APOL3O95236 402 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CHEK2O96017 543 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ATF3P18847 181 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 COX10Q12887 443 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 GUK1Q16774 197 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 OLFML2AQ68BL7 652 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RFX8Q6ZV50 586 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SCAIQ8N9R8 606 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SLC9A6Q92581 669 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 NOX5Q96PH1 765 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 LBHD1Q9BQE6 289 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 BEGAINQ9BUH8 593 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 L3MBTL1Q9Y468 752 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CACNA1CQ13936 2221 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ULK1O75385 1050 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 ATP6V1C1P21283 382 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 AARSP49588 968 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 HNMTP50135 292 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 APBA1Q02410 837 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 BIKQ13323 160 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 DGUOKQ16854 277 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 KBTBD12Q3ZCT8 623 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CKAP2LQ8IYA6 745 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 PPP1R13LQ8WUF5 828 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RNF34Q969K3 372 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 GAL3ST3Q96A11 431 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 CUEDC1Q9NWM3 386 aaPredicted RBP6.38□□□□□ -1.39
SCN2A-202ENST00000375427 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 TPCN1Q9ULQ1 816 aa6.38□□□□□ -1.39
SCN2A-202ENST00000375427 RALBP11234 206 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 CAPZA2P47755 286 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 RETREG2Q8NC44 543 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 GRK7Q8WTQ7 553 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 EXO5Q9H790 373 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 MAPK13O15264 365 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 HLA-DRAP01903 254 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 IGHMBP2P38935 993 aaKnown RBP6.37□□□□□ -1.39
SCN2A-202ENST00000375427 MTTPP55157 894 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 ANO1Q5XXA6 986 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 DCLK2Q8N568 766 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 TTC17Q96AE7 1141 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 ABCG4Q9H172 646 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 CNOT10Q9H9A5 744 aaKnown RBP6.37□□□□□ -1.39
SCN2A-202ENST00000375427 C12orf4Q9NQ89 552 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 SAMM50Q9Y512 469 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 TBC1D12O60347 775 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 SASH3O75995 380 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 RB1P06400 928 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 SDSP20132 328 aa6.37□□□□□ -1.39
SCN2A-202ENST00000375427 U2AF2P26368 475 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms