RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 KAT2BQ92831 832 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 HLA-CQ95604 372 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PNMA2Q9UL42 364 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GH1P01241 217 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SELPP16109 830 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MRPL12P52815 198 aaKnown RBP12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SEPT14Q6ZU15 432 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SYTL5Q8TDW5 730 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TNFRSF25Q93038 417 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LRFN3Q9BTN0 628 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GLT8D2Q9H1C3 349 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CLIC4Q9Y696 253 aa12.4□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MICAL3Q7RTP6 2002 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CCDC194A0A1B0GVG4 234 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 GOLGA6L4A6NEF3 574 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 B4DLN1 442 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 M0R2N6 131 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 NBNO60934 754 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 YEATS4O95619 227 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MBD3O95983 291 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ADCY7P51828 1080 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 UBE2HP62256 183 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 STK38Q15208 465 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 FAM117BQ6P1L5 589 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SESTD1Q86VW0 696 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 RIC8AQ9NPQ8 531 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ABCB11O95342 1321 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SPTLC2O15270 562 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CKBP12277 381 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 RBL2Q08999 1139 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KLHL40Q2TBA0 621 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TMEM31Q5JXX7 168 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CUL5Q93034 780 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 WNT8BQ93098 351 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 GTF2IRD1Q9UHL9 959 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CEP131Q9UPN4 1083 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MUC6Q6W4X9 2439 aa12.38□□□□□ -0.43
HLA-DQA1-202ENST00000374949 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ADAMTS3O15072 1205 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SORBS3O60504 671 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 GJB5O95377 273 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CXCL10P02778 98 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PSEN2P49810 448 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MFSD10Q14728 455 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MCTP2Q6DN12 878 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CD320Q9NPF0 282 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 C11orf16Q9NQ32 467 aa12.37□□□□□ -0.43
HLA-DQA1-202ENST00000374949 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PPP6R2O75170 966 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 BMP15O95972 392 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 F2P00734 622 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ME1P48163 572 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms