RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ACTN4O43707 911 aaKnown RBP16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 PSAPP07602 524 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SP4Q02446 784 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 HSDL1Q3SXM5 330 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 NAALADL2Q58DX5 795 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 MIS18BP1Q6P0N0 1132 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SEPT1Q8WYJ6 367 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 DHX58Q96C10 678 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 SPATA33Q96N06 139 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 GPR20Q99678 358 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 Q9Y3F1 56 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
SMPDL3B-201ENST00000373888 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 SEPT4O43236 478 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 XRCC6P12956 609 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 STAT6P42226 847 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 CYP4A11Q02928 519 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 BANK1Q8NDB2 785 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 LXNQ9BS40 222 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 CUEDC2Q9H467 287 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 STK17AQ9UEE5 414 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 PTPN22Q9Y2R2 807 aa16.39■□□□□ 0.21
SMPDL3B-201ENST00000373888 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 LYPLA2O95372 231 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 PTGS1P23219 599 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 GRK4P32298 578 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 QARSP47897 775 aaKnown RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 PSMC5P62195 406 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 CTTNQ14247 550 aaKnown RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 PDXDC2PQ6P474 469 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 POTEGQ6S5H5 508 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 CCDC60Q8IWA6 550 aaPredicted RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 LRRC15Q8TF66 581 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 PLIN2Q99541 437 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 BLOC1S4Q9NUP1 217 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 WRAP73Q9P2S5 460 aaPredicted RBP16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
SMPDL3B-201ENST00000373888 DUSP11O75319 330 aaKnown RBP16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 UGCGQ16739 394 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 AFAP1L1Q8TED9 768 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 ANP32BQ92688 251 aaKnown RBP16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 ATP6V0A1Q93050 837 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
SMPDL3B-201ENST00000373888 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 SYCE3A1L190 88 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 LGR5O75473 907 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 INHAP05111 366 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 SWSAP1Q6NVH7 229 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 KANK3Q6NY19 840 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 AFG1LQ8WV93 481 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 LARP4BQ92615 738 aaKnown RBP16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 RAD54LQ92698 747 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 LENG1Q96BZ8 264 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 PCYT2Q99447 389 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3B-201ENST00000373888 A6NJR5 290 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 E9PMD0 336 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 BACH1O14867 736 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 MMP3P08254 477 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 LBX1P52954 281 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 PSMC6P62333 389 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 PDE4CQ08493 712 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 FAM160B1Q5W0V3 765 aa16.35■□□□□ 0.21
SMPDL3B-201ENST00000373888 SH3RF1Q7Z6J0 888 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms