RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PICK1Q9NRD5 415 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 COL15A1P39059 1388 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 CCNI2Q6ZMN8 369 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 ATP6V1G3Q96LB4 118 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 BBOX1O75936 387 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 PDE6BP35913 854 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 BPIFB4P59827 614 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 BFSP1Q12934 665 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 SYDE2Q5VT97 1194 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 KAZNQ674X7 775 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 SFR1Q86XK3 245 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 TRIM11Q96F44 468 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 ODF2LQ9ULJ1 636 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 SPATA31D1Q6ZQQ2 1576 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 H0YCG3 227 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 LMNB2Q03252 620 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 ARHGEF16Q5VV41 709 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 PACSIN2Q9UNF0 486 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 ZBTB5O15062 677 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 ARHGEF18Q6ZSZ5 1173 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 CPSF2Q9P2I0 782 aaKnown RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 ANAPC5Q9UJX4 755 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 KRT19P08727 400 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 BMP3P12645 472 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 AP3B2Q13367 1082 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 POC1B-GALNT4F8VUJ3 575 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 NR3C1P04150 777 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 KLHL29Q96CT2 875 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 FUT8Q9BYC5 575 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 DNAJC12Q9UKB3 198 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 SART1O43290 800 aaKnown RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 RPSAP08865 295 aaKnown RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 YWHAEP62258 255 aaKnown RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 HIBCHQ6NVY1 386 aaPredicted RBP18.86■□□□□ 0.61
PTPRU-202ENST00000373779 C1orf167Q5SNV9 1468 aa18.86■□□□□ 0.61
PTPRU-202ENST00000373779 NLRP14Q86W24 1093 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 NSUN4Q96CB9 384 aaKnown RBP18.85■□□□□ 0.61
PTPRU-202ENST00000373779 COMMD10Q9Y6G5 202 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 TCP10L2B9ZVM9 353 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 GDF11O95390 407 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 TDP2O95551 362 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 ANKRD35Q8N283 1001 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 LARGE2Q8N3Y3 721 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■□□□□ 9.2
PTPRU-202ENST00000373779 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
PTPRU-202ENST00000373779 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 POTECB2RU33 542 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 STAM2O75886 525 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 CTTNQ14247 550 aaKnown RBP18.85■□□□□ 0.61
PTPRU-202ENST00000373779 LLGL1Q15334 1064 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 HADHQ16836 314 aaKnown RBP18.85■□□□□ 0.61
PTPRU-202ENST00000373779 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 TMOD4Q9NZQ9 345 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 PIK3CAP42336 1068 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 MXI1P50539 228 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 ADCY1Q08828 1119 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 APBB1IPQ7Z5R6 666 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-202ENST00000373779 HPS3Q969F9 1004 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 CNTNAP5Q8WYK1 1306 aa18.85■□□□□ 0.61
PTPRU-202ENST00000373779 MMEP08473 750 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 GIMAP8Q8ND71 665 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 PNKPQ96T60 521 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 DDX47Q9H0S4 455 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 GMNCA6NCL1 334 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 LUC7L3O95232 432 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 MAP7D1Q3KQU3 841 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 SUGCTQ9HAC7 445 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 SNX24Q9Y343 169 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 PODXLO00592 558 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 GCKP35557 465 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 PPP2R2AP63151 447 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 FBXL16Q8N461 479 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.84■□□□□ 0.618e-7■■□□□ 11.9
PTPRU-202ENST00000373779 RILPQ96NA2 401 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 DHX36Q9H2U1 1008 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 SFI1A8K8P3 1242 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 ZBTB22O15209 634 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 MAGOHP61326 146 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 SYNGAP1Q96PV0 1343 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 PPIP5K2O43314 1243 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 STK10O94804 968 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 CD44P16070 742 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 KNOP1Q1ED39 458 aaKnown RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 NAALADL2Q58DX5 795 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
PTPRU-202ENST00000373779 ILDR1Q86SU0 546 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-202ENST00000373779 FRMD3A2A2Y4 597 aa18.83■□□□□ 0.61
PTPRU-202ENST00000373779 HNRNPDLO14979 420 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms