RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 ATOH1Q92858 354 aaPredicted RBP17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 MRPL42Q9Y6G3 142 aaKnown RBP17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 SQORQ9Y6N5 450 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 IGHDP01880 384 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 ITGB1P05556 798 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 UBE3AQ05086 875 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 FBXO47Q5MNV8 452 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 IER5Q5VY09 327 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 FAM43BQ6ZT52 329 aaPredicted RBP17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 POF1BQ8WVV4 589 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 TNPO1Q92973 898 aaKnown RBP17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 AAASQ9NRG9 546 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 ERAP1Q9NZ08 941 aa17.11■□□□□ 0.33
CDKN1A-202ENST00000373711 HIP1O00291 1037 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 SP4Q02446 784 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 CAMK1Q14012 370 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 ADGRD2Q7Z7M1 963 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 CUL5Q93034 780 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 CDHR1Q96JP9 859 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 RPGRIP1Q96KN7 1286 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 NEK1Q96PY6 1258 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 TLE6Q9H808 572 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 DIAPH3Q9NSV4 1193 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 LRFN2Q9ULH4 789 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
CDKN1A-202ENST00000373711 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 SDSP20132 328 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 AVPR2P30518 371 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 MRPS6P82932 125 aaKnown RBP17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 GRIK4Q16099 956 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 RBM23Q86U06 439 aaKnown RBP17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 MICAL1Q8TDZ2 1067 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 PLXNA3P51805 1871 aa17.09■□□□□ 0.33
CDKN1A-202ENST00000373711 ZFHX2Q9C0A1 2572 aaPredicted RBP17.08■□□□□ 0.33
CDKN1A-202ENST00000373711 FNDC1Q4ZHG4 1894 aaPredicted RBP17.08■□□□□ 0.33
CDKN1A-202ENST00000373711 MBLAC1A4D2B0 266 aaPredicted RBP17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 SCG2P13521 617 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 DNAJB1P25685 340 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 SEMA3FQ13275 785 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 PAN2Q504Q3 1202 aaKnown RBP17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 GLG1Q92896 1179 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 PIGSQ96S52 555 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 BCAS3Q9H6U6 928 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 FAM86C1Q9NVL1 165 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 RTEL1Q9NZ71 1219 aa17.08■□□□□ 0.32
CDKN1A-202ENST00000373711 PTPRZ1P23471 2315 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 ERICH2A1L162 156 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 GLP2RO95838 553 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 CD52P31358 61 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 VCPP55072 806 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 TRDNQ13061 729 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 PAK2Q13177 524 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 GRM4Q14833 912 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 SEPT1Q8WYJ6 367 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 SMARCAD1Q9H4L7 1026 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 TLR9Q9NR96 1032 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
CDKN1A-202ENST00000373711 SPTBN4Q9H254 2564 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 PROB1E7EW31 1015 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 SEC23AQ15436 765 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 SUSD6Q92537 303 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 GPRASP2Q96D09 838 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 NR2E1Q9Y466 385 aa17.06■□□□□ 0.32
CDKN1A-202ENST00000373711 MARK3P27448 753 aa17.05■□□□□ 0.32
CDKN1A-202ENST00000373711 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
CDKN1A-202ENST00000373711 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms