RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 SLC5A5Q92911 643 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 PCYT2Q99447 389 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 TANC1Q9C0D5 1861 aa13.59□□□□□ -0.23
HDAC8-201ENST00000373554 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 CHMP2AO43633 222 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 SLC37A4O43826 429 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 MARCH6O60337 910 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 PSAPP07602 524 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 PFKMP08237 780 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 SFNP31947 248 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 RFC2P35250 354 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 FXR1P51114 621 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 JAK3P52333 1124 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 EPHB4P54760 987 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 ZNF200P98182 395 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 RBL2Q08999 1139 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 HIC1Q14526 733 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 SHHQ15465 462 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 EARS2Q5JPH6 523 aaKnown RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 ETNPPLQ8TBG4 499 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 DHX38Q92620 1227 aaKnown RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 SCLYQ96I15 445 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 IL23AQ9NPF7 189 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 SETD4Q9NVD3 440 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-201ENST00000373554 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.24
HDAC8-201ENST00000373554 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 TBX3O15119 743 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 TREHO43280 583 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 PSMD10O75832 226 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 PARNO95453 639 aaKnown RBP13.57□□□□□ -0.24
HDAC8-201ENST00000373554 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 CKBP12277 381 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 SELPP16109 830 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 GRIK4Q16099 956 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 LRIT3Q3SXY7 679 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 SWSAP1Q6NVH7 229 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 GJA10Q969M2 543 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 FAM20AQ96MK3 541 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.247e-6■■□□□ 11.5
HDAC8-201ENST00000373554 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
HDAC8-201ENST00000373554 FOXP1Q9H334 677 aaPredicted RBP13.57□□□□□ -0.24
HDAC8-201ENST00000373554 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 DISC1Q9NRI5 854 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
HDAC8-201ENST00000373554 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 NEMFO60524 1076 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 CAND2O75155 1236 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 ACRP10323 421 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 INSRRP14616 1297 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 THPOP40225 353 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 IGBP1P78318 339 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
HDAC8-201ENST00000373554 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 DEFB128Q7Z7B8 93 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 RDM1Q8NG50 284 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 GABBR1Q9UBS5 961 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
HDAC8-201ENST00000373554 HBP1O60381 514 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 BAG4O95429 457 aaKnown RBP13.55□□□□□ -0.24
HDAC8-201ENST00000373554 FGBP02675 491 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 RPLP2P05387 115 aaKnown RBP13.55□□□□□ -0.24
HDAC8-201ENST00000373554 GJB2P29033 226 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 ADAM17P78536 824 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 ZNF618Q5T7W0 954 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 SLFN12Q8IYM2 578 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 WNT8BQ93098 351 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 FAM167AQ96KS9 214 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 FTOQ9C0B1 505 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-201ENST00000373554 MAFBQ9Y5Q3 323 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-201ENST00000373554 COL1A2P08123 1366 aa13.55□□□□□ -0.24
HDAC8-201ENST00000373554 MBLAC1A4D2B0 266 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-201ENST00000373554 H3BQV1 296 aa13.54□□□□□ -0.24
HDAC8-201ENST00000373554 ACTN1P12814 892 aa13.54□□□□□ -0.24
HDAC8-201ENST00000373554 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms