RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ABCD1P33897 745 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 KRT80Q6KB66 452 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 HACE1Q8IYU2 909 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 PSPC1Q8WXF1 523 aaKnown RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 NOD1Q9Y239 953 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 ZBTB12Q9Y330 459 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 CHUKO15111 745 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 PRR29P0C7W0 189 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 PPP2R5CQ13362 524 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 PFKFB3Q16875 520 aaPredicted RBP15.33■□□□□ 0.05
LMX1B-202ENST00000373474 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 UNC13DQ70J99 1090 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 MAP7D3Q8IWC1 876 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 CDKL2Q92772 493 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 ATP6V0A1Q93050 837 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 HESX1Q9UBX0 185 aa15.33■□□□□ 0.05
LMX1B-202ENST00000373474 UBXN2AP68543 259 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 TMED2Q15363 201 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 DCAF15Q66K64 600 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 KIFC3Q9BVG8 833 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 NOVA2Q9UNW9 492 aaKnown RBP15.33■□□□□ 0.04
LMX1B-202ENST00000373474 CTNND1O60716 968 aaKnown RBP15.33■□□□□ 0.04
LMX1B-202ENST00000373474 TAB3Q8N5C8 712 aaPredicted RBP15.33■□□□□ 0.04
LMX1B-202ENST00000373474 CEP72Q9P209 647 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 PCYT1AP49585 367 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 DGKHQ86XP1 1220 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 NEK9Q8TD19 979 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 PARVGQ9HBI0 331 aa15.33■□□□□ 0.04
LMX1B-202ENST00000373474 SYF2O95926 243 aaKnown RBP15.32■□□□□ 0.04
LMX1B-202ENST00000373474 CDK8P49336 464 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 SCYL1Q96KG9 808 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ADPGKQ9BRR6 497 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ZMYND12Q9H0C1 365 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ADGRB3O60242 1522 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 CYP2E1P05181 493 aaPredicted RBP15.32■□□□□ 0.04
LMX1B-202ENST00000373474 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 SERPINB13Q9UIV8 391 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 USP27XA6NNY8 438 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ARHGEF9O43307 516 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 GPC4O75487 556 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 TFDP1Q14186 410 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 TSGA10IPQ3SY00 556 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ANO9A1A5B4 782 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 A6NJR5 290 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 KRT1P04264 644 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 CEP19Q96LK0 163 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 FMO2Q99518 471 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 MRPL47Q9HD33 250 aaKnown RBP15.32■□□□□ 0.04
LMX1B-202ENST00000373474 NFU1Q9UMS0 254 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 BMP3P12645 472 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 STX1BP61266 288 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ALCAMQ13740 583 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 ANKRD36BP1Q96IX9 119 aa15.32■□□□□ 0.04
LMX1B-202ENST00000373474 BRD2P25440 801 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 OCA2Q04671 838 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 MIS18BP1Q6P0N0 1132 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 NBPF10Q6P3W6 841 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 SPICE1Q8N0Z3 855 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 USP6NLQ92738 828 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 NUB1Q9Y5A7 615 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 E9PCH4 1651 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 CAPN9O14815 690 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 SERPINI1Q99574 410 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 GSTA1P08263 222 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 GSTA2P09210 222 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 GRM1Q13255 1194 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 E2F4Q16254 413 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 C6orf118Q5T5N4 469 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 ZC3H15Q8WU90 426 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 PIGBQ92521 554 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 SUGCTQ9HAC7 445 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 PLAAQ9Y263 795 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 USP42Q9H9J4 1324 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 PFDN6O15212 129 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 STAT2P52630 851 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 PPWD1Q96BP3 646 aaKnown RBP15.31■□□□□ 0.04
LMX1B-202ENST00000373474 MTA3Q9BTC8 594 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
LMX1B-202ENST00000373474 TRIM49BA6NDI0 452 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 RASGRF2O14827 1237 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 PALMO75781 387 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 MSH2P43246 934 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 ADCY2Q08462 1091 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 PROM2Q8N271 834 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 SCHIP1Q9P0W5 487 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-202ENST00000373474 CCDC188H7C350 402 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 BBOX1O75936 387 aa15.3■□□□□ 0.04
LMX1B-202ENST00000373474 APBA3O96018 575 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms