RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 BMP6P22004 513 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 TRADDQ15628 312 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ATP8B4Q8TF62 1192 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 USP42Q9H9J4 1324 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 SLC26A4O43511 780 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 COBLO75128 1261 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 PEX11AO75192 247 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 PORP16435 677 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 GPSM2P81274 684 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 METTL16Q86W50 562 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 FOXP4Q8IVH2 680 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC127Q96BQ5 260 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ASAP2O43150 1006 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 OXSR1O95747 527 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 HSD17B3P37058 310 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KRT83P78385 493 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 STKLD1Q8NE28 680 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 SCG3Q8WXD2 468 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 RUBCNQ92622 972 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 AZIN2Q96A70 460 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 FAM136AQ96C01 138 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 HSPBAP1Q96EW2 488 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 MAELQ96JY0 434 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ATP8A2Q9NTI2 1148 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 STOML1Q9UBI4 398 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 VHLP40337 213 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ZNF844Q08AG5 666 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 PDE1CQ14123 709 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KIF22Q14807 665 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ERMARDQ5T6L9 678 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 TREML1Q86YW5 311 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 USP6NLQ92738 828 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 NAP1L3Q99457 506 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ZBTB21Q9ULJ3 1066 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 RNF225M0QZC1 329 aaPredicted RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 RGL2O15211 777 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC82Q8N4S0 544 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 PRMT1Q99873 361 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 USP20Q9Y2K6 914 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 CPS1P31327 1500 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ADCY3O60266 1144 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KDM1AO60341 852 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 R3HDM1Q15032 1099 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 RC3H1Q5TC82 1133 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KRT12Q99456 494 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 INTS9Q9NV88 658 aaKnown RBP11.54□□□□□ -0.56
TRERF1-203ENST00000372917 DOLKQ9UPQ8 538 aa11.54□□□□□ -0.56
TRERF1-203ENST00000372917 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 ENTPD5O75356 428 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 WFS1O76024 890 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 SUN1O94901 812 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 VPS41P49754 854 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 HERVK_113P62684 666 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 CYP27A1Q02318 531 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 TBC1D9BQ66K14 1250 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 NAT14Q8WUY8 206 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 CASKIN2Q8WXE0 1202 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 HAPLN3Q96S86 360 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 LLPHQ9BRT6 129 aaKnown RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 LRRC27Q9C0I9 530 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 CNOT10Q9H9A5 744 aaKnown RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 ANO9A1A5B4 782 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 PAEPP09466 180 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 SNX30Q5VWJ9 437 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 HS2ST1Q7LGA3 356 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 MS4A14Q96JA4 679 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 OLFM3Q96PB7 478 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 ALDH8A1Q9H2A2 487 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 LGR6Q9HBX8 967 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 FAF1Q9UNN5 650 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
TRERF1-203ENST00000372917 SART1O43290 800 aaKnown RBP11.53□□□□□ -0.56
TRERF1-203ENST00000372917 ARFIP2P53365 341 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms