RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 AS3MTQ9HBK9 375 aa14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 LRRC37A2A6NM11 1700 aa14.29□□□□□ -0.12
CHCHD1-202ENST00000372837 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 GAKO14976 1311 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 TRANK1O15050 2925 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 SEPT4O43236 478 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 ZEB2O60315 1214 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 TIMP1P01033 207 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 ATP2B1P20020 1258 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 TRAPPC10P48553 1259 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 CUL4BQ13620 913 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 GRB14Q14449 540 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 CCDC178Q5BJE1 867 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 TRAPPC11Q7Z392 1133 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 COG1Q8WTW3 980 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 GTF3C2Q8WUA4 911 aaPredicted RBP14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 AIFM3Q96NN9 605 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 SLC28A3Q9HAS3 691 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 RWDD2AQ9UIY3 292 aa14.28□□□□□ -0.12
CHCHD1-202ENST00000372837 OPA1O60313 960 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 PPFIA3O75145 1194 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 FGRP09769 529 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 TNFRSF8P28908 595 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 KRT2P35908 639 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 ADKP55263 362 aaKnown RBP14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 PDE4BQ07343 736 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 RBL2Q08999 1139 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 NNTQ13423 1086 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 MCM6Q14566 821 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 RRP12Q5JTH9 1297 aaKnown RBP14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 WDR78Q5VTH9 848 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 ALS2CLQ60I27 953 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 MFSD5Q6N075 450 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 LRRC31Q6UY01 552 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 RAD9BQ6WBX8 426 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 CCDC91Q7Z6B0 441 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 TADA2BQ86TJ2 420 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 CCDC170Q8IYT3 715 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 UIMC1Q96RL1 719 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 TSGA10Q9BZW7 698 aa14.27□□□□□ -0.13
CHCHD1-202ENST00000372837 A0A087WWV3 80 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 ORC4O43929 436 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 ACRP10323 421 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 RXRAP19793 462 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 SEC23AQ15436 765 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 TSR1Q2NL82 804 aaKnown RBP14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 YTHDF3Q7Z739 585 aaKnown RBP14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 TAX1BP1Q86VP1 789 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 C3orf20Q8ND61 904 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 MYCBPQ99417 103 aaPredicted RBP14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 COG5Q9UP83 839 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 FAN1Q9Y2M0 1017 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 RABGAP1Q9Y3P9 1069 aa14.26□□□□□ -0.13
CHCHD1-202ENST00000372837 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 TNKSO95271 1327 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 CFAP54Q96N23 3096 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 CSF2RAP15509 400 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 JAG1P78504 1218 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 PPIGQ13427 754 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 GLE1Q53GS7 698 aaKnown RBP14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 FIGNQ5HY92 759 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 PRAMEF19Q5SWL8 479 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 MCTP2Q6DN12 878 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 ANKRD33Q7Z3H0 272 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 SLC35F6Q8N357 371 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 EIF1ADQ8N9N8 165 aaKnown RBP14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 TOX2Q96NM4 488 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 PNKPQ96T60 521 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 PHOX2BQ99453 314 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 KCNH6Q9H252 994 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 SENP2Q9HC62 589 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 ABHD10Q9NUJ1 306 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 SERTAD1Q9UHV2 236 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 TBX21Q9UL17 535 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
CHCHD1-202ENST00000372837 A0A1W2PQ45 241 aaPredicted RBP14.24□□□□□ -0.13
CHCHD1-202ENST00000372837 A0A1W2PQY0 241 aa14.24□□□□□ -0.13
CHCHD1-202ENST00000372837 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
CHCHD1-202ENST00000372837 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
CHCHD1-202ENST00000372837 EBAG9O00559 213 aa14.24□□□□□ -0.13
CHCHD1-202ENST00000372837 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms