RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 TUFT1Q9NNX1 390 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 CHMP2AO43633 222 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 TGFB3P10600 412 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 AFMP43652 599 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 KRT76Q01546 638 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 SP2Q02086 613 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 ARMCX2Q7L311 632 aa20.57■□□□□ 0.88
VEGFA-206ENST00000372077 POTEB3A0JP26 581 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 MUTP22033 750 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 MAP2K5Q13163 448 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 POTEBQ6S5H4 581 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 SPATA20Q8TB22 786 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 MAML3Q96JK9 1138 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 XPO4Q9C0E2 1151 aaKnown RBP20.56■□□□□ 0.88
VEGFA-206ENST00000372077 KIAA1024Q9UPX6 916 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 PCDHA5Q9Y5H7 936 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 SLITRK3O94933 977 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 SARSP49591 514 aaKnown RBP20.56■□□□□ 0.88
VEGFA-206ENST00000372077 ZNF746Q6NUN9 644 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-206ENST00000372077 MIER3Q7Z3K6 550 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 NPLOC4Q8TAT6 608 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 RAD54LQ92698 747 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 SLC5A4Q9NY91 659 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 RGL1Q9NZL6 768 aa20.56■□□□□ 0.88
VEGFA-206ENST00000372077 CCNE2O96020 404 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 HOXC6P09630 235 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 DPYDQ12882 1025 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 KCNV1Q6PIU1 500 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 RDM1Q8NG50 284 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 NEK9Q8TD19 979 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 DYDC2Q96IM9 177 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 GJD2Q9UKL4 321 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 GTPBP6O43824 516 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-206ENST00000372077 LARP4BQ92615 738 aaKnown RBP20.55■□□□□ 0.88
VEGFA-206ENST00000372077 STAMQ92783 540 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 BCAS3Q9H6U6 928 aa20.55■□□□□ 0.88
VEGFA-206ENST00000372077 CTGFP29279 349 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 SFNP31947 248 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 JAK3P52333 1124 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 HTRA3P83110 453 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 CEP135Q66GS9 1140 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 EEPD1Q7L9B9 569 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 MSL3Q8N5Y2 521 aaKnown RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 ANO10Q9NW15 660 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 MYL1P05976 194 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 THSD7BQ9C0I4 1608 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 MTERF4Q7Z6M4 381 aaKnown RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 GIMAP8Q8ND71 665 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 KATNBL1Q9H079 304 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 JPH1Q9HDC5 661 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 SLC9A2Q9UBY0 812 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 TCEAL9Q9UHQ7 104 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 DDX41Q9UJV9 622 aaKnown RBP20.54■□□□□ 0.88
VEGFA-206ENST00000372077 MCM3APO60318 1980 aa20.54■□□□□ 0.88
VEGFA-206ENST00000372077 WDR64B1ANS9 1081 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 UBA1P22314 1058 aaKnown RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 MCM6Q14566 821 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SV2BQ7L1I2 683 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 FBXO16Q8IX29 292 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CCDC112Q8NEF3 446 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 VTA1Q9NP79 307 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SYNGAP1Q96PV0 1343 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 E9PMD0 336 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SNAI1O95863 264 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 P4HBP07237 508 aaKnown RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CASP1P29466 404 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CUL4BQ13620 913 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CTTNQ14247 550 aaKnown RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 CCDC62Q6P9F0 684 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SMAP1Q8IYB5 467 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-206ENST00000372077 LRRN4CLQ8ND94 238 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 SMARCE1Q969G3 411 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 C7orf25Q9BPX7 421 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 TINF2Q9BSI4 451 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 MGAMO43451 1857 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
VEGFA-206ENST00000372077 RBM47A0AV96 593 aaKnown RBP20.52■□□□□ 0.88
VEGFA-206ENST00000372077 TNPO2O14787 897 aaKnown RBP20.52■□□□□ 0.88
VEGFA-206ENST00000372077 TBC1D8O95759 1140 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 AMPD3Q01432 767 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 NEDD9Q14511 834 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 ARIH2O95376 493 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 PSMC6P62333 389 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 LACTBP83111 547 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-206ENST00000372077 TAPT1Q6NXT6 567 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 TPH2Q8IWU9 490 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 BLZF1Q9H2G9 400 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 DNM3Q9UQ16 869 aa20.52■□□□□ 0.88
VEGFA-206ENST00000372077 ECM2O94769 699 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-206ENST00000372077 CYFIP1Q7L576 1253 aa20.51■□□□□ 0.87
VEGFA-206ENST00000372077 WRAP73Q9P2S5 460 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms