RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PRPF4BQ13523 1007 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 KNOP1Q1ED39 458 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PDXDC2PQ6P474 469 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 CYFIP1Q7L576 1253 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 CD302Q8IX05 232 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 MCPH1Q8NEM0 835 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 SMC6Q96SB8 1091 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 OSBPL9Q96SU4 736 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 VCXQ9H320 206 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PLCH1Q4KWH8 1693 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 ZEB2O60315 1214 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PRELPP51888 382 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 MDM2Q00987 491 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 KRT76Q01546 638 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 DMP1Q13316 513 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 Q4G0T1 1027 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 RFFLQ8WZ73 363 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 RBM41Q96IZ5 413 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 ABCB6Q9NP58 842 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 IL9RQ01113 521 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 MMS22LQ6ZRQ5 1243 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 MAPKAPK5Q8IW41 473 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 ZSWIM4Q9H7M6 989 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 EPB41L4AQ9HCS5 686 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 FGFR1OP2Q9NVK5 253 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 RAB20Q9NX57 234 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 DDX56Q9NY93 547 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 BCCIPQ9P287 314 aaKnown RBP eCLIP7.92□□□□□ -1.14
VTA1-202ENST00000367630 HEXIM1O94992 359 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 BMP3P12645 472 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 POLR2FP61218 127 aaKnown RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 TROAPQ12815 778 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 COASYQ13057 564 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 NR5A1Q13285 461 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 TRPC3Q13507 836 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 TFDP1Q14186 410 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 DAAM2Q86T65 1068 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 RTKN2Q8IZC4 609 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 MREGQ8N565 214 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 ADAM21Q9UKJ8 722 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PHACTR2O75167 634 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 AGTP01019 485 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 ERCC3P19447 782 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 EPHA7Q15375 998 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 NAB2Q15742 525 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PHLDB2Q86SQ0 1253 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 KLHL14Q9P2G3 628 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 BIN2Q9UBW5 565 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 ZHX1Q9UKY1 873 aaPredicted RBP7.92□□□□□ -1.14
VTA1-202ENST00000367630 ATP1A3P13637 1013 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 NR1D1P20393 614 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 PDZD4Q76G19 769 aaPredicted RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 GMCL1P1Q8NEA9 526 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 MASTLQ96GX5 879 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 GPCPD1Q9NPB8 672 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 PCDHA1Q9Y5I3 950 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 FAM205AQ6ZU69 1335 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 TUBGCP6Q96RT7 1819 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ECEL1O95672 775 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 CNGA1P29973 690 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 SNCBQ16143 134 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 FAM47AQ5JRC9 791 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 LRP10Q7Z4F1 713 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ATP6V1G3Q96LB4 118 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 STRIP2Q9ULQ0 834 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 TMEM253P0C7T8 217 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ARID5BQ14865 1188 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 SRRM1Q8IYB3 904 aaKnown RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 ACTRT1Q8TDG2 376 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 SCLT1Q96NL6 688 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 RIOK1Q9BRS2 568 aaKnown RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 DESI2Q9BSY9 194 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 FAM207AQ9NSI2 230 aaPredicted RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 SAMM50Q9Y512 469 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ANKRD36CQ5JPF3 1778 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 LAMA4Q16363 1823 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 KCNK3O14649 394 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 PTK2Q05397 1052 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ASPHQ12797 758 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 KRT71Q3SY84 523 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 KDM7AQ6ZMT4 941 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 GTF3C2Q8WUA4 911 aaPredicted RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 STK33Q9BYT3 514 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 FAM124BQ9H5Z6 455 aaPredicted RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 GSTA1P08263 222 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 CCNI2Q6ZMN8 369 aaPredicted RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 YTHDF3Q7Z739 585 aaKnown RBP7.91□□□□□ -1.14
VTA1-202ENST00000367630 SMC1BQ8NDV3 1235 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 RPS6KC1Q96S38 1066 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 RIT2Q99578 217 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 NRBP2Q9NSY0 501 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 HACD3Q9P035 362 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 FAN1Q9Y2M0 1017 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 TOMM70O94826 608 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 ATF2P15336 505 aa7.91□□□□□ -1.14
VTA1-202ENST00000367630 CCND2P30279 289 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms