RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 BACH2Q9BYV9 841 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
SF3B5-201ENST00000367569 SLC9A2Q9UBY0 812 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 GTF2IRD1Q9UHL9 959 aa16.65■□□□□ 0.26
SF3B5-201ENST00000367569 MYH9P35579 1960 aaKnown RBP16.64■□□□□ 0.25
SF3B5-201ENST00000367569 H3BRB1 525 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 PPFIA4O75335 1185 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 CCNE2O96020 404 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 CYP3A4P08684 503 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 SMIM10L2AP0DMW4 78 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 SMIM10L2BP0DMW5 78 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 GPNMBQ14956 572 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 TJAP1Q5JTD0 557 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 PIK3AP1Q6ZUJ8 805 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 DHX38Q92620 1227 aaKnown RBP16.64■□□□□ 0.25
SF3B5-201ENST00000367569 LENG9Q96B70 501 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 ZBTB10Q96DT7 871 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 ZNF577Q9BSK1 485 aa16.64■□□□□ 0.25
SF3B5-201ENST00000367569 TUT1Q9H6E5 874 aaKnown RBP16.64■□□□□ 0.25
SF3B5-201ENST00000367569 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 CHMP2AO43633 222 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 ST18O60284 1047 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 CA3P07451 260 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 XBP1P17861 261 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 KRT2P35908 639 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 ACTR2P61160 394 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 NONOQ15233 471 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF3B5-201ENST00000367569 LETM2Q2VYF4 491 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 KRT40Q6A162 431 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 GIMAP8Q8ND71 665 aaPredicted RBP16.63■□□□□ 0.25
SF3B5-201ENST00000367569 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 AFAP1L1Q8TED9 768 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 WASF1Q92558 559 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
SF3B5-201ENST00000367569 GLG1Q92896 1179 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 PCYT2Q99447 389 aa16.63■□□□□ 0.25
SF3B5-201ENST00000367569 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 RFXAPO00287 272 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 IPO5O00410 1097 aaKnown RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 SLC37A4O43826 429 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 ARHGEF15O94989 841 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 IGBP1P78318 339 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 NIPA1Q7RTP0 329 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 KRT25Q7Z3Z0 450 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 TEX2Q8IWB9 1127 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 ZSCAN31Q96LW9 406 aaPredicted RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 SLC9A7Q96T83 725 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 CERS4Q9HA82 394 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 ZNF215Q9UL58 517 aaPredicted RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 NFASCO94856 1347 aa16.62■□□□□ 0.25
SF3B5-201ENST00000367569 PRRC2BQ5JSZ5 2229 aaKnown RBP16.62■□□□□ 0.25
SF3B5-201ENST00000367569 NCOR1O75376 2440 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 TRANK1O15050 2925 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 MSH4O15457 936 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
SF3B5-201ENST00000367569 MMP1P03956 469 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 SELPP16109 830 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 TRIM29Q14134 588 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 LRRC8DQ7L1W4 858 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 HERC6Q8IVU3 1022 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 CCDC60Q8IWA6 550 aaPredicted RBP16.61■□□□□ 0.25
SF3B5-201ENST00000367569 DIS3L2Q8IYB7 885 aaKnown RBP16.61■□□□□ 0.25
SF3B5-201ENST00000367569 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 TRAPPC12Q8WVT3 735 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 SEPT1Q8WYJ6 367 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 RNPEPQ9H4A4 650 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
SF3B5-201ENST00000367569 THEGQ9P2T0 379 aa16.61■□□□□ 0.25
SF3B5-201ENST00000367569 LOXHD1Q8IVV2 1947 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 C17orf102A2RUQ5 167 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 BTBD18B2RXH4 712 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 WNT7AO00755 349 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 BACH1O14867 736 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TREHO43280 583 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 NBNO60934 754 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 BAIAP3O94812 1187 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 CTSHP09668 335 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 CKBP12277 381 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 CIITAP33076 1130 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 RBL2Q08999 1139 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 ATXN2LQ8WWM7 1075 aaKnown RBP16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TCEAL9Q9UHQ7 104 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 TRPC6Q9Y210 931 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 EMSYQ7Z589 1322 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 REV3LO60673 3130 aa16.6■□□□□ 0.25
SF3B5-201ENST00000367569 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 MAFGO15525 162 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 CXCL10P02778 98 aa16.59■□□□□ 0.25
SF3B5-201ENST00000367569 WDR5P61964 334 aaKnown RBP16.59■□□□□ 0.25
SF3B5-201ENST00000367569 TAP1Q03518 808 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms