RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 PCDHGC5Q9Y5F6 944 aa9.22□□□□□ -0.93
PACRG-202ENST00000366888 MRPL42Q9Y6G3 142 aaKnown RBP9.22□□□□□ -0.93
PACRG-202ENST00000366888 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.93
PACRG-202ENST00000366888 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 ERICH2A1L162 156 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 MEIS2O14770 477 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 STAM2O75886 525 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 DGKIO75912 1065 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 MMP1P03956 469 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 NDUFV1P49821 464 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 PTH1RQ03431 593 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 TMEM62Q0P6H9 643 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 TRDNQ13061 729 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 TRAF1Q13077 416 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 FBXO47Q5MNV8 452 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 MARCH8Q5T0T0 291 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 PCNX4Q63HM2 1172 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 TAF2Q6P1X5 1199 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 RALYLQ86SE5 291 aaKnown RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 POP1Q99575 1024 aaKnown RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 UPF3BQ9BZI7 483 aaKnown RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 RWDD1Q9H446 243 aaPredicted RBP9.21□□□□□ -0.94
PACRG-202ENST00000366888 TUBE1Q9UJT0 475 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 PLAGL2Q9UPG8 496 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 RWDD3Q9Y3V2 267 aa9.21□□□□□ -0.94
PACRG-202ENST00000366888 E7EWF7 191 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 NCK2O43639 380 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 ITGB1P05556 798 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 KCNA2P16389 499 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 ITGB5P18084 799 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 ANTXR2P58335 489 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 MRPS6P82932 125 aaKnown RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 ADAM15Q13444 863 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 UBE2SQ16763 222 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 HERC4Q5GLZ8 1057 aaPredicted RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 IER5LQ5T953 404 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 TSHZ1Q6ZSZ6 1077 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 RBM23Q86U06 439 aaKnown RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 RTN4RL1Q86UN2 441 aaPredicted RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 NLRX1Q86UT6 975 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 RAB11FIP4Q86YS3 637 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 PRSS33Q8NF86 280 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 TRAPPC12Q8WVT3 735 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 GLG1Q92896 1179 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 CUL5Q93034 780 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 SENP7Q9BQF6 1050 aa9.2□□□□□ -0.94
PACRG-202ENST00000366888 BARX2Q9UMQ3 279 aaPredicted RBP9.2□□□□□ -0.94
PACRG-202ENST00000366888 hCG_1642624A0A1W2PR95 340 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 MBLAC1A4D2B0 266 aaPredicted RBP9.19□□□□□ -0.94
PACRG-202ENST00000366888 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 GLP2RO95838 553 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 INSRRP14616 1297 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 RXRAP19793 462 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 NRIP1P48552 1158 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 RBM10P98175 930 aaKnown RBP9.19□□□□□ -0.94
PACRG-202ENST00000366888 TMEM266Q2M3C6 531 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 CATIPQ7Z7H3 387 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 RSPH3Q86UC2 560 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 ZNF654Q8IZM8 581 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 SPPL3Q8TCT6 385 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 EDAQ92838 391 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 RRP36Q96EU6 259 aaKnown RBP9.19□□□□□ -0.94
PACRG-202ENST00000366888 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 PCYT2Q99447 389 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 ERAP1Q9NZ08 941 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 CLEC1BQ9P126 229 aa9.19□□□□□ -0.94
PACRG-202ENST00000366888 MYO10Q9HD67 2058 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 PLXNA3P51805 1871 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 TMEM221A6NGB7 291 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 M0R296 226 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 PER2O15055 1255 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 PDE4AP27815 886 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 SART3Q15020 963 aaKnown RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 CMTR2Q8IYT2 770 aaKnown RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 EFHBQ8N7U6 833 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 GIMAP8Q8ND71 665 aaPredicted RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 NCOA7Q8NI08 942 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 CTCFLQ8NI51 663 aaPredicted RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 EXOC6Q8TAG9 804 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 IGDCC4Q8TDY8 1250 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 SEPT1Q8WYJ6 367 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 P2RX5Q93086 422 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 SPZ1Q9BXG8 430 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
PACRG-202ENST00000366888 SEC63Q9UGP8 760 aaKnown RBP9.18□□□□□ -0.94
PACRG-202ENST00000366888 PADI3Q9ULW8 664 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms