RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 WRNIP1Q96S55 665 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 PNMA2Q9UL42 364 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 PTPRSQ13332 1948 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 CXCL11O14625 94 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 MFAP3LO75121 409 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 LGR5O75473 907 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 ABL1P00519 1130 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 EDN1P05305 212 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
CNIH4-202ENST00000366857 USH1GQ495M9 461 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 DCAF15Q66K64 600 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 SPECC1LQ69YQ0 1117 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 SLC39A4Q6P5W5 647 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 RDM1Q8NG50 284 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
CNIH4-202ENST00000366857 PTPN18Q99952 460 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 MORF4L1Q9UBU8 362 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 AGTPBP1Q9UPW5 1226 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 CTNND2Q9UQB3 1225 aa10.39□□□□□ -0.75
CNIH4-202ENST00000366857 FNDC1Q4ZHG4 1894 aaPredicted RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 SMC2O95347 1197 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 Q3C1V9 767 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 HOOK2Q96ED9 719 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 TMOD2Q9NZR1 351 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 RSPH10B2B2RC85 870 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 TLR2O60603 784 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 RSPH10BP0C881 870 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 HOXC8P31273 242 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 RTP1P59025 263 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 COG2Q14746 738 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 ZNF720Q7Z2F6 126 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 NEK9Q8TD19 979 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 NIFKQ9BYG3 293 aaKnown RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 EVPLQ92817 2033 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 MAFGO15525 162 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 PPP1R2P41236 205 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 GTF2BQ00403 316 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 KCNA1Q09470 495 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 FILIP1Q7Z7B0 1213 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 HAPLN2Q9GZV7 340 aa10.38□□□□□ -0.75
CNIH4-202ENST00000366857 RAVER2Q9HCJ3 691 aaKnown RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 AJAP1Q9UKB5 411 aaPredicted RBP10.38□□□□□ -0.75
CNIH4-202ENST00000366857 MAPK13O15264 365 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 ZNF792Q3KQV3 632 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 CCDC113Q9H0I3 377 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 ZHX2Q9Y6X8 837 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 ADGRA3Q8IWK6 1321 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 G3V3G9 751 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 PEX10O60683 326 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 RARRES1P49788 294 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 RBL2Q08999 1139 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 KCNJ12Q14500 433 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 DCAF8Q5TAQ9 597 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 NOC3LQ8WTT2 800 aaKnown RBP10.37□□□□□ -0.75
CNIH4-202ENST00000366857 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 RGL1Q9NZL6 768 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 CEP350Q5VT06 3117 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 STX10O60499 249 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 COBLO75128 1261 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 TRAF1Q13077 416 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 PRR16Q569H4 304 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 PPP1R13BQ96KQ4 1090 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 XPNPEP1Q9NQW7 623 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 ABHD10Q9NUJ1 306 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
CNIH4-202ENST00000366857 PIGRP01833 764 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 KLK7P49862 253 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 HMGCS2P54868 508 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 MYBPC2Q14324 1141 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 SNX29Q8TEQ0 813 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 CEP63Q96MT8 703 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 IKZF4Q9H2S9 585 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 KIAA1024Q9UPX6 916 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
CNIH4-202ENST00000366857 ADRB2P07550 413 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 ADSSP30520 456 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 GSDMDP57764 484 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 MKRN4PQ13434 485 aaPredicted RBP10.36□□□□□ -0.75
CNIH4-202ENST00000366857 PTPN21Q16825 1174 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 ZNF746Q6NUN9 644 aaPredicted RBP10.36□□□□□ -0.75
CNIH4-202ENST00000366857 DRC7Q8IY82 874 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 CHST13Q8NET6 341 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 CXorf38Q8TB03 319 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
CNIH4-202ENST00000366857 TAPT1Q6NXT6 567 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 CCDC174Q6PII3 467 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 SV2BQ7L1I2 683 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 SHCBP1Q8NEM2 672 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 DYDC2Q96IM9 177 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
CNIH4-202ENST00000366857 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms