RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 CBX4O00257 560 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 DDX3XO00571 662 aaKnown RBP eCLIP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 SCDO00767 359 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 MAFKO60675 156 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 KLHL18O94889 574 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 MMEP08473 750 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 IGFALSP35858 605 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 GLRBP48167 497 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 SARSP49591 514 aaKnown RBP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 PCBP1Q15365 356 aaKnown RBP eCLIP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 CRY1Q16526 586 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 FAM47CQ5HY64 1035 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 NT5DC1Q5TFE4 455 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 CDCA2Q69YH5 1023 aaPredicted RBP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 LRSAM1Q6UWE0 723 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 TRIM48Q8IWZ4 208 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 ZDHHC14Q8IZN3 488 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 STPG3Q8N7X2 389 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 TXNDC5Q8NBS9 432 aaKnown RBP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 ASB15Q8WXK1 588 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 APPBP2Q92624 585 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 NINJ1Q92982 152 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 FOXRED1Q96CU9 486 aaPredicted RBP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 TMEM209Q96SK2 561 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 YIPF4Q9BSR8 244 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 DLL4Q9NR61 685 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 RTEL1Q9NZ71 1219 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 H2AFY2Q9P0M6 372 aaPredicted RBP2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 NTMQ9P121 344 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 SAMD15Q9P1V8 674 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 ZFP69BQ9UJL9 534 aa2.85□□□□□ -1.95
RNU6-271P-201ENST00000363858 A0A087X0B3 334 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ZNF891A8MT65 544 aaPredicted RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 GSG1L2A8MUP6 293 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 B4GALT3O60512 393 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 CDC45O75419 566 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ASLP04424 464 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 JMJD7P0C870 316 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 NAT1P18440 290 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 POU3F2P20265 443 aaPredicted RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 IL13P35225 146 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 KCNC1P48547 511 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ST5P78524 1137 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 IL13RA1P78552 427 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 TCEA2Q15560 299 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 RGL3Q3MIN7 710 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 PLEKHG4Q58EX7 1191 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 PIK3R6Q5UE93 754 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 MCTP2Q6DN12 878 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 VASNQ6EMK4 673 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ESRP1Q6NXG1 681 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 PKN3Q6P5Z2 889 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 NOP9Q86U38 636 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 RTN4RL1Q86UN2 441 aaPredicted RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 HOMER1Q86YM7 354 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 DHX37Q8IY37 1157 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 NLGN4XQ8N0W4 816 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 CHST14Q8NCH0 376 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ORAI3Q9BRQ5 295 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 TACO1Q9BSH4 297 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 TARS2Q9BW92 718 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 ZCCHC4Q9H5U6 513 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 PCDH18Q9HCL0 1135 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 NGRNQ9NPE2 291 aaKnown RBP2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 RIC8BQ9NVN3 520 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 RAPGEFL1Q9UHV5 662 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 CROTQ9UKG9 612 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 PTPN22Q9Y2R2 807 aa2.84□□□□□ -1.95
RNU6-271P-201ENST00000363858 SLC12A8A0AV02 714 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 TLDC2A0PJX2 215 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 PRAMEF25A6NGN4 478 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 SMARCA5O60264 1052 aaPredicted RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 OPA1O60313 960 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 KPNA6O60684 536 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 NPTXRO95502 500 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 ENO2P09104 434 aaPredicted RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 ATP2A2P16615 1042 aaKnown RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 PTGS1P23219 599 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 PTX3P26022 381 aaPredicted RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 SDHAP31040 664 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 CSF2RBP32927 897 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 GJA4P35212 333 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 IRF9Q00978 393 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 DSG1Q02413 1049 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 STILQ15468 1287 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 FAM26FQ5R3K3 315 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 KANK2Q63ZY3 851 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 FERMT3Q86UX7 667 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 LRRTM3Q86VH5 581 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 SP8Q8IXZ3 490 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 NIM1KQ8IY84 436 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 BCL6BQ8N143 479 aaPredicted RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 IGDCC4Q8TDY8 1250 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 DDX1Q92499 740 aaKnown RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 CLIC6Q96NY7 704 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 FEZ1Q99689 392 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 BOCQ9BWV1 1114 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 SSBP3Q9BWW4 388 aaPredicted RBP2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 KCNH7Q9NS40 1196 aa2.83□□□□□ -1.96
RNU6-271P-201ENST00000363858 INTS7Q9NVH2 962 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms