RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 ZNF365Q70YC5 407 aa13.04□□□□□ -0.32
EPHB4-202ENST00000360620 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
EPHB4-202ENST00000360620 APTXQ7Z2E3 356 aaKnown RBP13.04□□□□□ -0.32
EPHB4-202ENST00000360620 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
EPHB4-202ENST00000360620 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
EPHB4-202ENST00000360620 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
EPHB4-202ENST00000360620 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
EPHB4-202ENST00000360620 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 LMNB1P20700 586 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 CDK17Q00537 523 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
EPHB4-202ENST00000360620 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
EPHB4-202ENST00000360620 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
EPHB4-202ENST00000360620 MESDQ14696 234 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 PPP2R5AQ15172 486 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 SUGP1Q8IWZ8 645 aaKnown RBP13.03□□□□□ -0.32
EPHB4-202ENST00000360620 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 SLC16A2P36021 539 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 PLCB3Q01970 1234 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 TLR10Q9BXR5 811 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
EPHB4-202ENST00000360620 A0A087X0T9 212 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 RASGRF2O14827 1237 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 RIMBP2O15034 1052 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 HIP1RO75146 1068 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 FAM153BP0C7A2 387 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 FAM228BP0C875 321 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.32
EPHB4-202ENST00000360620 CDK8P49336 464 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 ADCY1Q08828 1119 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 FAM153CQ494X1 144 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 IRF2BP1Q8IU81 584 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 ANKS1AQ92625 1134 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 CAVIN3Q969G5 261 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.32
EPHB4-202ENST00000360620 FAM153AQ9UHL3 310 aa13.02□□□□□ -0.32
EPHB4-202ENST00000360620 TTI1O43156 1089 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 ITIH3Q06033 890 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 DRP2Q13474 957 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 NAB2Q15742 525 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 TRIM68Q6AZZ1 485 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
EPHB4-202ENST00000360620 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
EPHB4-202ENST00000360620 ELF1P32519 619 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 HSD17B3P37058 310 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 MYO1EQ12965 1108 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 ZNF211Q13398 564 aaPredicted RBP13.02□□□□□ -0.33
EPHB4-202ENST00000360620 ASPRV1Q53RT3 343 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 SEC16BQ96JE7 1060 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 RUNDC3BQ96NL0 473 aa13.02□□□□□ -0.33
EPHB4-202ENST00000360620 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
EPHB4-202ENST00000360620 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-202ENST00000360620 STXBP3O00186 592 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 GAS8O95995 478 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 TTMPQ5BVD1 217 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 OTUD6AQ7L8S5 288 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.33
EPHB4-202ENST00000360620 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 POTECB2RU33 542 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 ATP2A1O14983 1001 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-202ENST00000360620 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 LMNTD2Q8IXW0 634 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 MTRQ99707 1265 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 ISCUQ9H1K1 167 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 PKD2L1Q9P0L9 805 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 ACTN1P12814 892 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 GBP1P32455 592 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 SLFN12Q8IYM2 578 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 SLITRK6Q9H5Y7 841 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
EPHB4-202ENST00000360620 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
EPHB4-202ENST00000360620 THAP12O43422 761 aa13□□□□□ -0.33
EPHB4-202ENST00000360620 KRT15P19012 456 aa13□□□□□ -0.33
EPHB4-202ENST00000360620 HOXA7P31268 230 aaPredicted RBP13□□□□□ -0.33
EPHB4-202ENST00000360620 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
EPHB4-202ENST00000360620 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
EPHB4-202ENST00000360620 CEP95Q96GE4 821 aa13□□□□□ -0.33
EPHB4-202ENST00000360620 PPP1R12CQ9BZL4 782 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms