RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 FAM153CQ494X1 144 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 CCDC38Q502W7 563 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 INTS8Q75QN2 995 aaKnown RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 COA7Q96BR5 231 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 LSM14BQ9BX40 385 aaKnown RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 FAM153AQ9UHL3 310 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 AKAP11Q9UKA4 1901 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 ANKRD62A6NC57 917 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 POTEMA6NI47 508 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 AGPSO00116 658 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 SEPT7Q16181 437 aaKnown RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 ACCSLQ4AC99 568 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 LRRC47Q8N1G4 583 aaKnown RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 IQCDQ96DY2 449 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 DNAJC7Q99615 494 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 CAPN6Q9Y6Q1 641 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 LRP6O75581 1613 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 ZNF76P36508 570 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 PRPHP41219 470 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 ADCY7P51828 1080 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 MUM1Q2TAK8 710 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 LMBR1Q8WVP7 490 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 NUCKS1Q9H1E3 243 aaKnown RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 ADAMTS1Q9UHI8 967 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 CCDC160A6NGH7 325 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 MMEP08473 750 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 RCSD1Q6JBY9 416 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 TTI2Q6NXR4 508 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 TBC1D5Q92609 795 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 CUL5Q93034 780 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 GPR101Q96P66 508 aaPredicted RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 GGA1Q9UJY5 639 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 UTP11Q9Y3A2 253 aaKnown RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 REXO2Q9Y3B8 237 aaKnown RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 USH1CQ9Y6N9 552 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 DISP2A7MBM2 1401 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 CDK8P49336 464 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 LLGL1Q15334 1064 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 NPY5RQ15761 445 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 THEMIS2Q5TEJ8 643 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 RNF10Q8N5U6 811 aaKnown RBP10.88□□□□□ -0.67
RNF40-202ENST00000357890 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
RNF40-202ENST00000357890 PPP2R2AP63151 447 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 SNX1Q13596 522 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 MFSD14BQ5SR56 506 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 TXNRD3Q86VQ6 643 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 CCDC65Q8IXS2 484 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 CTNNBL1Q8WYA6 563 aaPredicted RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 OSBPL1AQ9BXW6 950 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 TMEM260Q9NX78 707 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 A0A1W2PRG0 241 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 STXBP3O00186 592 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 KIF3CO14782 793 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 GBP1P32455 592 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 GRAPQ13588 217 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 WDR59Q6PJI9 974 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 SLC30A9Q6PML9 568 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 HOOK3Q86VS8 718 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 IRF2BP1Q8IU81 584 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 GRAPLQ8TC17 118 aaPredicted RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 ARHGEF2Q92974 986 aaKnown RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 SLIT2O94813 1529 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 RCCD1A6NED2 376 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 PALMO75781 387 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 RBM5P52756 815 aaKnown RBP eCLIP10.87□□□□□ -0.67
RNF40-202ENST00000357890 LRRC14Q15048 493 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 ASIC2Q16515 512 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 TSNAXIP1Q2TAA8 658 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 PAPD7Q5XG87 772 aaKnown RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 DENND2CQ68D51 928 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 TRMT1LQ7Z2T5 733 aaKnown RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 DDX12PQ92771 950 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 DDX47Q9H0S4 455 aaKnown RBP10.87□□□□□ -0.67
RNF40-202ENST00000357890 SERPINA10Q9UK55 444 aa10.87□□□□□ -0.67
RNF40-202ENST00000357890 C4AP0C0L4 1744 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 C4BP0C0L5 1744 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 CETN3O15182 167 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 TRIM37O94972 964 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 GLI1P08151 1106 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
RNF40-202ENST00000357890 FKBP3Q00688 224 aaKnown RBP10.86□□□□□ -0.67
RNF40-202ENST00000357890 FAM133AQ8N9E0 248 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 ZNF384Q8TF68 577 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 TRIM7Q9C029 511 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 IL17RBQ9NRM6 502 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 PANK4Q9NVE7 773 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 KBTBD4Q9NVX7 518 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 FBXL5Q9UKA1 691 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms