RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 RAD51CO43502 376 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 CYP7A1P22680 504 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 SLC1A4P43007 532 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 RASSF7Q02833 373 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 STK4Q13043 487 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 BYSLQ13895 437 aaKnown RBP11.67□□□□□ -0.54
CAPN3-205ENST00000357568 CROCCP2Q86T23 111 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 TAF4BQ92750 862 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 EBF2Q9HAK2 575 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 ZNF804BA4D1E1 1349 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 MINDY4BA8MYZ0 360 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 IRF6O14896 467 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 PPIP5K2O43314 1243 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 PALMO75781 387 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 PLCG1P19174 1290 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 DRD4P21917 467 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 GUCY2FP51841 1108 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 ASIC1P78348 528 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 GPSM2P81274 684 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 UBE4AQ14139 1066 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 ZKSCAN8Q15776 578 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 CCDC178Q5BJE1 867 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 TLCD1Q96CP7 247 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 SMARCAL1Q9NZC9 954 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 LRP2BPQ9P2M1 347 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 EPHB6O15197 1021 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 ASAP2O43150 1006 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 UAP1Q16222 522 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 STAG2Q8N3U4 1231 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 KIAA0895Q8NCT3 520 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 RSRC1Q96IZ7 334 aaKnown RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 MS4A14Q96JA4 679 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 EYA3Q99504 573 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 MMRN2Q9H8L6 949 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 PPANQ9NQ55 473 aaKnown RBP11.66□□□□□ -0.54
CAPN3-205ENST00000357568 GGA1Q9UJY5 639 aa11.66□□□□□ -0.54
CAPN3-205ENST00000357568 FAM205AQ6ZU69 1335 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 hCG_1642624A0A1W2PR95 340 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 USP11P51784 963 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 CACNA2D4Q7Z3S7 1137 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 HVCN1Q96D96 273 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 TSG101Q99816 390 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 TRIM6Q9C030 488 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-205ENST00000357568 CCDC134Q9H6E4 229 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-205ENST00000357568 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 AIPL1Q9NZN9 384 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 MYH10P35580 1976 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 GNA14O95837 355 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 OR52Z1P0C646 297 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 CTNNA1P35221 906 aaKnown RBP11.65□□□□□ -0.54
CAPN3-205ENST00000357568 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
CAPN3-205ENST00000357568 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-205ENST00000357568 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 PPP2R5EQ16537 467 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 KRT25Q7Z3Z0 450 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 FAM129AQ9BZQ8 928 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 TMEM60Q9H2L4 133 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 FAM114A2Q9NRY5 505 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 ANKIB1Q9P2G1 1089 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 SLC12A4Q9UP95 1085 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
CAPN3-205ENST00000357568 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CCT8L1PA6NM43 557 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 ATP6V1G2O95670 118 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 SCP2P22307 547 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CLNS1AP54105 237 aaKnown RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 ELF3P78545 371 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-205ENST00000357568 ICA1Q05084 483 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 RPS6KA1Q15418 735 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 C11orf91Q3C1V1 193 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 HOOK3Q86VS8 718 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CCDC197Q8NCU1 140 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CUL5Q93034 780 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
CAPN3-205ENST00000357568 DICER1Q9UPY3 1922 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms