RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KIAA1841Q6NSI8 718 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PYROXD1Q8WU10 500 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SUCLG2Q96I99 432 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 DACH2Q96NX9 599 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 COPEO14579 308 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 MED7O43513 233 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PSMD2Q13200 908 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PDCLQ13371 301 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 RGS9BPQ6ZS82 235 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 CHMP6Q96FZ7 201 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 CARSP49589 748 aaKnown RBP13.8□□□□□ -0.2
SMC4-202ENST00000357388 IGBP1P78318 339 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 SUFUQ9UMX1 484 aa13.8□□□□□ -0.2
SMC4-202ENST00000357388 ADCY9O60503 1353 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 MIF4GDA9UHW6 222 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 KRT38O76015 456 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 KRT75O95678 551 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 ARL4AP40617 200 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 ECT2Q9H8V3 914 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 H0Y626 953 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 E2F6O75461 281 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 TRIM16O95361 564 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 ZSCAN20P17040 1043 aaPredicted RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 TMPRSS15P98073 1019 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 ABCB5Q2M3G0 1257 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 CPSF3Q9UKF6 684 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 GRID2IPA4D2P6 1211 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 RAD23BP54727 409 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 CCDC22O60826 627 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 BASP1P80723 227 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 SKOR1P84550 965 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 TSTA3Q13630 321 aaPredicted RBP13.79□□□□□ -0.2
SMC4-202ENST00000357388 PTPROQ16827 1216 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 TBK1Q9UHD2 729 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 ERBB4Q15303 1308 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
SMC4-202ENST00000357388 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
SMC4-202ENST00000357388 A0A0G2JND7 137 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
SMC4-202ENST00000357388 MAPRE2Q15555 327 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 DCLK2Q8N568 766 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ANKRD36BP1Q96IX9 119 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 PCDHB4Q9Y5E5 795 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 DNAAF3Q8N9W5 541 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 EHD2Q9NZN4 543 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 NFU1Q9UMS0 254 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 H0Y3Z8 333 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ARL4CP56559 192 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ZC3H12BQ5HYM0 836 aaKnown RBP13.78□□□□□ -0.2
SMC4-202ENST00000357388 KIAA0825Q8IV33 1275 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ACRBPQ8NEB7 543 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 KIF2CQ99661 725 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 SH3GL2Q99962 352 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 ADCY1Q08828 1119 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
SMC4-202ENST00000357388 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
SMC4-202ENST00000357388 KIAA0232Q92628 1395 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 SOWAHDA6NJG2 315 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 NR2F2P24468 414 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 EIF4A3P38919 411 aaKnown RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 G2E3Q7L622 706 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.2
SMC4-202ENST00000357388 AMNQ9BXJ7 453 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 SNX25Q9H3E2 840 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 TMEM206Q9H813 350 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.22e-16■■■■■ 56.2
SMC4-202ENST00000357388 FTCDO95954 541 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 BTDP43251 543 aa13.77□□□□□ -0.2
SMC4-202ENST00000357388 TMEM259Q4ZIN3 620 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms