RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
RPE-201ENST00000354506 KLRC1P26715 233 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 PDE6BP35913 854 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 IRX3P78415 501 aaPredicted RBP10.55□□□□□ -0.72
RPE-201ENST00000354506 CFAP221Q4G0U5 840 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 GBP6Q6ZN66 633 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 CD302Q8IX05 232 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 C1orf131Q8NDD1 294 aaKnown RBP10.55□□□□□ -0.72
RPE-201ENST00000354506 PPM1EQ8WY54 764 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 INPP4AQ96PE3 977 aaPredicted RBP10.55□□□□□ -0.72
RPE-201ENST00000354506 DAGLAQ9Y4D2 1042 aa10.55□□□□□ -0.72
RPE-201ENST00000354506 HSF2BPO75031 334 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TTLL1O95922 423 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 CPP00450 1065 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TMOD1P28289 359 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 SLC16A2P36021 539 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 PICALMQ13492 652 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 CCDC40Q4G0X9 1142 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 IRF2BP2Q7Z5L9 587 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 SLF2Q8IX21 1173 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 FAM133AQ8N9E0 248 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TBC1D5Q92609 795 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 NT5C3AQ9H0P0 336 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 LRRC4CQ9HCJ2 640 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 DDX4Q9NQI0 724 aaKnown RBP10.54□□□□□ -0.72
RPE-201ENST00000354506 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
RPE-201ENST00000354506 SHTN1A0MZ66 631 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 CYP11B2P19099 503 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 INPP5BP32019 993 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 HOXD13P35453 343 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 ACTN3Q08043 901 aaPredicted RBP10.54□□□□□ -0.72
RPE-201ENST00000354506 SPIRE1Q08AE8 756 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 IFT88Q13099 833 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 EDRF1Q3B7T1 1238 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 FAM26FQ5R3K3 315 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 CEP85LQ5SZL2 805 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TTBK2Q6IQ55 1244 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 TBC1D16Q8TBP0 767 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 PCDHA12Q9UN75 941 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
RPE-201ENST00000354506 ATP8B3O60423 1300 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 PITPNM2Q9BZ72 1349 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 A0A087X0T9 212 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 ZBTB5O15062 677 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 EIF3HO15372 352 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPE-201ENST00000354506 UFL1O94874 794 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 FAM228BP0C875 321 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 SNAP25P60880 206 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 TRAPPC3LQ5T215 181 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 EPM2AIP1Q7L775 607 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 CD248Q9HCU0 757 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 CHORDC1Q9UHD1 332 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 GGA1Q9UJY5 639 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 TRAF3IP3Q9Y228 551 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 KDM3AQ9Y4C1 1321 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 KLRG2A4D1S0 409 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 E9PMD0 336 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 HOXA10P31260 410 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 SHMT1P34896 483 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 USP11P51784 963 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 CDC37Q16543 378 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 ODF2Q5BJF6 829 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 CFAP58Q5T655 872 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 EIF1ADQ8N9N8 165 aaKnown RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 CNBD1Q8NA66 436 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 CUL5Q93034 780 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 JPH2Q9BR39 696 aaPredicted RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 EP400Q96L91 3159 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 ZNF233A6NK53 670 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 E7EVH7 732 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 KCNK3O14649 394 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 OPA1O60313 960 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 PLA2G4BP0C869 781 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 HDLBPQ00341 1268 aaKnown RBP10.53□□□□□ -0.72
RPE-201ENST00000354506 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 PLCB1Q9NQ66 1216 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
RPE-201ENST00000354506 UBR3Q6ZT12 1888 aa10.52□□□□□ -0.72
RPE-201ENST00000354506 MEIS1O00470 390 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 BBOX1O75936 387 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 ECHS1P30084 290 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 RFC4P35249 363 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.73
RPE-201ENST00000354506 KIAA0753Q2KHM9 967 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 DPP8Q6V1X1 898 aaPredicted RBP10.52□□□□□ -0.73
RPE-201ENST00000354506 IFT20Q8IY31 132 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 LRRC57Q8N9N7 239 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 DPH5Q9H2P9 285 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 KIAA1024Q9UPX6 916 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 A6NNZ2 444 aa10.52□□□□□ -0.73
RPE-201ENST00000354506 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms