RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SEC31AO94979 1220 aaKnown RBP10.77□□□□□ -0.69
COL11A1-201ENST00000353414 ASMTLO95671 621 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 FAM26FQ5R3K3 315 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 OR8K1Q8NGG5 319 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 TEKT4Q8WW24 435 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 ABHD8Q96I13 439 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 PPP1R9AQ9ULJ8 1098 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 POLR3AO14802 1390 aaPredicted RBP10.77□□□□□ -0.69
COL11A1-201ENST00000353414 MYO5CQ9NQX4 1742 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 ZRANB2O95218 330 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL11A1-201ENST00000353414 BMP3P12645 472 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 KRT10P13645 584 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 COPB2P35606 906 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 CENPAP49450 140 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 TMEM62Q0P6H9 643 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 SLFNL1Q499Z3 407 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 C11orf96Q7Z7L8 435 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 SRPK1Q96SB4 655 aaKnown RBP10.77□□□□□ -0.69
COL11A1-201ENST00000353414 AMNQ9BXJ7 453 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 HPCAL4Q9UM19 191 aa10.77□□□□□ -0.69
COL11A1-201ENST00000353414 UBA6A0AVT1 1052 aaPredicted RBP10.76□□□□□ -0.69
COL11A1-201ENST00000353414 POU5F1BQ06416 359 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 SCRN1Q12765 414 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 FAF2Q96CS3 445 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 DFFAO00273 331 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 E2F5Q15329 346 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 SIK2Q9H0K1 926 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 ZC4H2Q9NQZ6 224 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 DOLKQ9UPQ8 538 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
COL11A1-201ENST00000353414 PSMA2P25787 234 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 ADORA2BP29275 332 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 EIF4A1P60842 406 aaKnown RBP10.76□□□□□ -0.69
COL11A1-201ENST00000353414 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 ATL3Q6DD88 541 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 XDHP47989 1333 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 SNX2O60749 519 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 AP1B1Q10567 949 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 GOLGA5Q8TBA6 731 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 CCDC78A2IDD5 438 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 IL13P35225 146 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 WRNIP1Q96S55 665 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 HEMGNQ9BXL5 484 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 EPB41L5Q9HCM4 733 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 EPS15L1Q9UBC2 864 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 BCAP29Q9UHQ4 241 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 TEKT2Q9UIF3 430 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
COL11A1-201ENST00000353414 CLCN1P35523 988 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 RBL2Q08999 1139 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 TAS2R42Q7RTR8 314 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 RAET1EQ8TD07 263 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 INTS4Q96HW7 963 aaKnown RBP10.75□□□□□ -0.69
COL11A1-201ENST00000353414 CAPN11Q9UMQ6 739 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 GTPBP10A4D1E9 387 aaKnown RBP10.75□□□□□ -0.69
COL11A1-201ENST00000353414 PTK2BQ14289 1009 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 SPON2Q9BUD6 331 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 E5RI56 91 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 AFPP02771 609 aaKnown RBP10.75□□□□□ -0.69
COL11A1-201ENST00000353414 LCP1P13796 627 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 RNF207Q6ZRF8 634 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 B4GALNT2Q8NHY0 566 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 CASS4Q9NQ75 786 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 CASP14P31944 242 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 BBS9Q3SYG4 887 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 CIAPIN1Q6FI81 312 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 NLGN1Q8N2Q7 840 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 ANTXR1Q9H6X2 564 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 SPTLC3Q9NUV7 552 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 MAP3K7O43318 606 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 MED7O43513 233 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 PSAPP07602 524 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 PHKG2P15735 406 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 USP14P54578 494 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 PPP2R2CQ9Y2T4 447 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 MRFAP1Q9Y605 127 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 ACSL3O95573 720 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 CPB1P15086 417 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 ERFP50548 548 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 IFT88Q13099 833 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 PDCD2Q16342 344 aaPredicted RBP10.75□□□□□ -0.69
COL11A1-201ENST00000353414 RINLQ6ZS11 566 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 TUBGCP2Q9BSJ2 902 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 BABAM1Q9NWV8 329 aa10.75□□□□□ -0.69
COL11A1-201ENST00000353414 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 TUBB4BP68371 445 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 LCORLQ8N3X6 602 aa10.74□□□□□ -0.69
COL11A1-201ENST00000353414 LARP4BQ92615 738 aaKnown RBP10.74□□□□□ -0.69
COL11A1-201ENST00000353414 TESK2Q96S53 571 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms