RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 POLLQ9UGP5 575 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 ADAMTS1Q9UHI8 967 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 C6orf229H3BNL8 230 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 MYBP10242 640 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 SFMBT2Q5VUG0 894 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 CENPPQ6IPU0 288 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 CUL5Q93034 780 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 MYH7BA7E2Y1 1941 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 A0A087X0T9 212 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 DAPK3O43293 454 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 FAM228BP0C875 321 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 POLR2FP61218 127 aaKnown RBP23.4■■□□□ 1.34
TRIM3-201ENST00000345851 TBC1D22AQ8WUA7 517 aa23.4■■□□□ 1.34
TRIM3-201ENST00000345851 DCP1AQ9NPI6 582 aaPredicted RBP23.4■■□□□ 1.34
TRIM3-201ENST00000345851 CTNND1O60716 968 aaKnown RBP23.39■■□□□ 1.34
TRIM3-201ENST00000345851 DNAJC8O75937 253 aaPredicted RBP23.39■■□□□ 1.34
TRIM3-201ENST00000345851 KCNMA1Q12791 1236 aa23.39■■□□□ 1.34
TRIM3-201ENST00000345851 LRRC41Q15345 812 aa23.39■■□□□ 1.34
TRIM3-201ENST00000345851 RPS6KA1Q15418 735 aa23.39■■□□□ 1.34
TRIM3-201ENST00000345851 CRY2Q49AN0 593 aa23.39■■□□□ 1.34
TRIM3-201ENST00000345851 TBC1D1Q86TI0 1168 aaPredicted RBP23.39■■□□□ 1.34
TRIM3-201ENST00000345851 SART1O43290 800 aaKnown RBP23.39■■□□□ 1.33
TRIM3-201ENST00000345851 ORC4O43929 436 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 PDE6BP35913 854 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 CUL1Q13616 776 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 RAPGEF1Q13905 1077 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 C7orf25Q9BPX7 421 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 PCDHGC5Q9Y5F6 944 aa23.39■■□□□ 1.33
TRIM3-201ENST00000345851 LDHBP07195 334 aaKnown RBP23.38■■□□□ 1.33
TRIM3-201ENST00000345851 TECP42680 631 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
TRIM3-201ENST00000345851 AMACRQ9UHK6 382 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 KCNG1Q9UIX4 513 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 PCDHA6Q9UN73 950 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 PCDHA8Q9Y5H6 950 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 FAM83BQ5T0W9 1011 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 GLIS3Q8NEA6 775 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 CHMP6Q96FZ7 201 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 TRIM31Q9BZY9 425 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 DPH5Q9H2P9 285 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 KDM4CQ9H3R0 1056 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 LUC7LQ9NQ29 371 aaKnown RBP23.38■■□□□ 1.33
TRIM3-201ENST00000345851 MCM9Q9NXL9 1143 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.38■■□□□ 1.33
TRIM3-201ENST00000345851 DUOX1Q9NRD9 1551 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 CCT8L1PA6NM43 557 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 HEATR3Q7Z4Q2 680 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 CCDC63Q8NA47 563 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 CCDC197Q8NCU1 140 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 TMEM59LQ9UK28 342 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 PNMA2Q9UL42 364 aa23.38■■□□□ 1.33
TRIM3-201ENST00000345851 RBAK-RBAKDNI3L0D1 243 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 SERPING1P05155 500 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 GCKP35557 465 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 PEX19P40855 299 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 DHX9Q08211 1270 aaKnown RBP23.37■■□□□ 1.33
TRIM3-201ENST00000345851 LETM2Q2VYF4 491 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 NBPF9Q3BBW0 867 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 FAM133BQ5BKY9 247 aaKnown RBP23.37■■□□□ 1.33
TRIM3-201ENST00000345851 AGBL2Q5U5Z8 902 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 SH3RF3Q8TEJ3 882 aaPredicted RBP23.37■■□□□ 1.33
TRIM3-201ENST00000345851 PSMD1Q99460 953 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 LSM14BQ9BX40 385 aaKnown RBP23.37■■□□□ 1.33
TRIM3-201ENST00000345851 GGA1Q9UJY5 639 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 ARMC9Q7Z3E5 817 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 XPO6Q96QU8 1125 aaKnown RBP23.37■■□□□ 1.33
TRIM3-201ENST00000345851 CD209Q9NNX6 404 aa23.37■■□□□ 1.33
TRIM3-201ENST00000345851 PAEPP09466 180 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 FAM133AQ8N9E0 248 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 SPDL1Q96EA4 605 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 DYNLL2Q96FJ2 89 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
TRIM3-201ENST00000345851 ITGA4P13612 1032 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 ANKS1AQ92625 1134 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 SELENOSQ9BQE4 189 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 CELF4Q9BZC1 486 aaKnown RBP23.36■■□□□ 1.33
TRIM3-201ENST00000345851 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
TRIM3-201ENST00000345851 CUEDC2Q9H467 287 aa23.36■■□□□ 1.33
TRIM3-201ENST00000345851 CCNT1O60563 726 aaKnown RBP23.35■■□□□ 1.33
TRIM3-201ENST00000345851 SLC18A3Q16572 532 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 ATP6V0A2Q9Y487 856 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 NOL4O94818 638 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 GHRP10912 638 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 PPP1R2P41236 205 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 AMPD3Q01432 767 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 BRIP1Q9BX63 1249 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 SAP30BPQ9UHR5 308 aaKnown RBP23.35■■□□□ 1.33
TRIM3-201ENST00000345851 ATP8A1Q9Y2Q0 1164 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 MYH1P12882 1939 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 MYH4Q9Y623 1939 aa23.35■■□□□ 1.33
TRIM3-201ENST00000345851 SMIM23A6NLE4 172 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 KIF4AO95239 1232 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 ANP32DO95626 131 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 KLHL30Q0D2K2 578 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 SEMA3FQ13275 785 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 TMC3Q7Z5M5 1100 aa23.34■■□□□ 1.33
TRIM3-201ENST00000345851 TBC1D16Q8TBP0 767 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms