RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 KCNJ2P63252 427 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 GPR162Q16538 588 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 GKAP1Q5VSY0 366 aaPredicted RBP12.96□□□□□ -0.34
RTN3-203ENST00000341307 RNF220Q5VTB9 566 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 HAUS3Q68CZ6 603 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 GALNT17Q6IS24 598 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 CREG2Q8IUH2 290 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 TRIM22Q8IYM9 498 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 RAPGEF5Q92565 580 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 HAUS4Q9H6D7 363 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 STIM2Q9P246 746 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 AGAP1Q9UPQ3 857 aa12.96□□□□□ -0.34
RTN3-203ENST00000341307 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 STK36Q9NRP7 1315 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 PHF20L1A8MW92 1017 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 IL1R1P14778 569 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 DRD4P21917 467 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 CDC25AP30304 524 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 BTDP43251 543 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 PLCD1P51178 756 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 TGFB2P61812 414 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 HERVK_113P62684 666 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 MRPS35P82673 323 aaKnown RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 MDM2Q00987 491 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 TROAPQ12815 778 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 NR5A1Q13285 461 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 Q4G0T1 1027 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 TRIM68Q6AZZ1 485 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 IQCEQ6IPM2 695 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 CHP1Q99653 195 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 TRIM7Q9C029 511 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 NID2Q14112 1375 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 SMAPO00193 183 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 ZNF189O75820 626 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 NDUFA10O95299 355 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 STAT6P42226 847 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 GTF2IP78347 998 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 PAK2Q13177 524 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 FOXB2Q5VYV0 432 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 ARMC9Q7Z3E5 817 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 ZNF572Q7Z3I7 529 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 DIS3L2Q8IYB7 885 aaKnown RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 PHC3Q8NDX5 983 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 CEP131Q9UPN4 1083 aa12.95□□□□□ -0.34
RTN3-203ENST00000341307 EPN1Q9Y6I3 576 aaPredicted RBP12.95□□□□□ -0.34
RTN3-203ENST00000341307 MMP1P03956 469 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 PAEPP09466 180 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 NQO1P15559 274 aaKnown RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 SP100P23497 879 aaPredicted RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 ARFGAP2Q8N6H7 521 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 ARL10Q8N8L6 244 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 SLC35B4Q969S0 331 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 LAMB1P07942 1786 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 ORC4O43929 436 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 DEXIO95424 95 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 PSMC4P43686 418 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 TFAP4Q01664 338 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 SBK1Q52WX2 424 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 MREGQ8N565 214 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 MAP3K14Q99558 947 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 IL17RBQ9NRM6 502 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 CNOT8Q9UFF9 292 aaKnown RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
RTN3-203ENST00000341307 V9GY48 417 aaPredicted RBP12.94□□□□□ -0.34
RTN3-203ENST00000341307 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 BAG3O95817 575 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
RTN3-203ENST00000341307 ITIH3Q06033 890 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 CCDC15Q0P6D6 951 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 FUT2Q10981 343 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 SLC39A14Q15043 492 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PKN1Q16512 942 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms